Gene : Lsat_1_v5_gn_5_3960 L. sativa V8
Defline:  (1 of 1) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  114
Name:  ? Lsat_1_v5_gn_5_3960 Secondary Identifier:  ? PAC:38968662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_3960 0.5kb upstream 0.5kb upstream 4532   true Lsat_1_v8_lg_5: 6546541-6551072 Lactuca sativa
Lsat_1_v5_gn_5_3960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 6546541-6547040 Lactuca sativa
Lsat_1_v5_gn_5_3960 0.5kb downstream 0.5kb downstream 4532   true Lsat_1_v8_lg_5: 6547041-6551572 Lactuca sativa
Lsat_1_v5_gn_5_3960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 6551073-6551572 Lactuca sativa
Lsat_1_v5_gn_5_3960 1.0kb upstream 1.0kb upstream 5032   true Lsat_1_v8_lg_5: 6546041-6551072 Lactuca sativa
Lsat_1_v5_gn_5_3960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 6546041-6547040 Lactuca sativa
Lsat_1_v5_gn_5_3960 1.0kb downstream 1.0kb downstream 5032   true Lsat_1_v8_lg_5: 6547041-6552072 Lactuca sativa
Lsat_1_v5_gn_5_3960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 6551073-6552072 Lactuca sativa
Lsat_1_v5_gn_5_3960 2.0kb upstream 2.0kb upstream 6032   true Lsat_1_v8_lg_5: 6545041-6551072 Lactuca sativa
Lsat_1_v5_gn_5_3960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 6545041-6547040 Lactuca sativa
Lsat_1_v5_gn_5_3960 2.0kb downstream 2.0kb downstream 6032   true Lsat_1_v8_lg_5: 6547041-6553072 Lactuca sativa
Lsat_1_v5_gn_5_3960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 6551073-6553072 Lactuca sativa
Lsat_1_v5_gn_5_3960 5.0kb upstream 5.0kb upstream 9032   true Lsat_1_v8_lg_5: 6542041-6551072 Lactuca sativa
Lsat_1_v5_gn_5_3960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 6542041-6547040 Lactuca sativa
Lsat_1_v5_gn_5_3960 5.0kb downstream 5.0kb downstream 9032   true Lsat_1_v8_lg_5: 6547041-6556072 Lactuca sativa
Lsat_1_v5_gn_5_3960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 6551073-6556072 Lactuca sativa
Lsat_1_v5_gn_5_3960 10.0kb upstream 10.0kb upstream 14032   true Lsat_1_v8_lg_5: 6537041-6551072 Lactuca sativa
Lsat_1_v5_gn_5_3960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 6537041-6547040 Lactuca sativa
Lsat_1_v5_gn_5_3960 10.0kb downstream 10.0kb downstream 14032   true Lsat_1_v8_lg_5: 6547041-6561072 Lactuca sativa
Lsat_1_v5_gn_5_3960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 6551073-6561072 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470483 5263 Asterids View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain