Gene : Lsat_1_v5_gn_5_42641 L. sativa V8
Defline:  (1 of 2) PTHR10048//PTHR10048:SF22 - PHOSPHATIDYLINOSITOL KINASE // PHOSPHATIDYLINOSITOL 4-KINASE BETA Genomic Order:  1116
Name:  ? Lsat_1_v5_gn_5_42641 Secondary Identifier:  ? PAC:38967635
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6351 Lactuca sativa pathologic  
Lsativa PWY-6352 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_42641 0.5kb upstream 0.5kb upstream 7219   true Lsat_1_v8_lg_5: 89360874-89368092 Lactuca sativa
Lsat_1_v5_gn_5_42641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 89367593-89368092 Lactuca sativa
Lsat_1_v5_gn_5_42641 0.5kb downstream 0.5kb downstream 7219   true Lsat_1_v8_lg_5: 89360374-89367592 Lactuca sativa
Lsat_1_v5_gn_5_42641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 89360374-89360873 Lactuca sativa
Lsat_1_v5_gn_5_42641 1.0kb upstream 1.0kb upstream 7719   true Lsat_1_v8_lg_5: 89360874-89368592 Lactuca sativa
Lsat_1_v5_gn_5_42641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 89367593-89368592 Lactuca sativa
Lsat_1_v5_gn_5_42641 1.0kb downstream 1.0kb downstream 7719   true Lsat_1_v8_lg_5: 89359874-89367592 Lactuca sativa
Lsat_1_v5_gn_5_42641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 89359874-89360873 Lactuca sativa
Lsat_1_v5_gn_5_42641 2.0kb upstream 2.0kb upstream 8719   true Lsat_1_v8_lg_5: 89360874-89369592 Lactuca sativa
Lsat_1_v5_gn_5_42641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 89367593-89369592 Lactuca sativa
Lsat_1_v5_gn_5_42641 2.0kb downstream 2.0kb downstream 8719   true Lsat_1_v8_lg_5: 89358874-89367592 Lactuca sativa
Lsat_1_v5_gn_5_42641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 89358874-89360873 Lactuca sativa
Lsat_1_v5_gn_5_42641 5.0kb upstream 5.0kb upstream 11719   true Lsat_1_v8_lg_5: 89360874-89372592 Lactuca sativa
Lsat_1_v5_gn_5_42641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 89367593-89372592 Lactuca sativa
Lsat_1_v5_gn_5_42641 5.0kb downstream 5.0kb downstream 11719   true Lsat_1_v8_lg_5: 89355874-89367592 Lactuca sativa
Lsat_1_v5_gn_5_42641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 89355874-89360873 Lactuca sativa
Lsat_1_v5_gn_5_42641 10.0kb upstream 10.0kb upstream 16719   true Lsat_1_v8_lg_5: 89360874-89377592 Lactuca sativa
Lsat_1_v5_gn_5_42641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 89367593-89377592 Lactuca sativa
Lsat_1_v5_gn_5_42641 10.0kb downstream 10.0kb downstream 16719   true Lsat_1_v8_lg_5: 89350874-89367592 Lactuca sativa
Lsat_1_v5_gn_5_42641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 89350874-89360873 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474375 5263 Asterids View MSA
123749784 5271 Pentapetalae View MSA
122786671 5272 Eudicot View MSA
122047104 5273 Angiosperm View MSA
121345174 5274 Embryophyte View MSA
123380170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain