Gene : Lsat_1_v5_gn_5_45321 L. sativa V8
Defline:  (1 of 3) KOG2296 - Integral membrane protein Genomic Order:  1195
Name:  ? Lsat_1_v5_gn_5_45321 Secondary Identifier:  ? PAC:38963844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_45321 0.5kb upstream 0.5kb upstream 9267   true Lsat_1_v8_lg_5: 97804712-97813978 Lactuca sativa
Lsat_1_v5_gn_5_45321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 97813479-97813978 Lactuca sativa
Lsat_1_v5_gn_5_45321 0.5kb downstream 0.5kb downstream 9267   true Lsat_1_v8_lg_5: 97804212-97813478 Lactuca sativa
Lsat_1_v5_gn_5_45321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 97804212-97804711 Lactuca sativa
Lsat_1_v5_gn_5_45321 1.0kb upstream 1.0kb upstream 9767   true Lsat_1_v8_lg_5: 97804712-97814478 Lactuca sativa
Lsat_1_v5_gn_5_45321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 97813479-97814478 Lactuca sativa
Lsat_1_v5_gn_5_45321 1.0kb downstream 1.0kb downstream 9767   true Lsat_1_v8_lg_5: 97803712-97813478 Lactuca sativa
Lsat_1_v5_gn_5_45321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 97803712-97804711 Lactuca sativa
Lsat_1_v5_gn_5_45321 2.0kb upstream 2.0kb upstream 10767   true Lsat_1_v8_lg_5: 97804712-97815478 Lactuca sativa
Lsat_1_v5_gn_5_45321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 97813479-97815478 Lactuca sativa
Lsat_1_v5_gn_5_45321 2.0kb downstream 2.0kb downstream 10767   true Lsat_1_v8_lg_5: 97802712-97813478 Lactuca sativa
Lsat_1_v5_gn_5_45321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 97802712-97804711 Lactuca sativa
Lsat_1_v5_gn_5_45321 5.0kb upstream 5.0kb upstream 13767   true Lsat_1_v8_lg_5: 97804712-97818478 Lactuca sativa
Lsat_1_v5_gn_5_45321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 97813479-97818478 Lactuca sativa
Lsat_1_v5_gn_5_45321 5.0kb downstream 5.0kb downstream 13767   true Lsat_1_v8_lg_5: 97799712-97813478 Lactuca sativa
Lsat_1_v5_gn_5_45321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 97799712-97804711 Lactuca sativa
Lsat_1_v5_gn_5_45321 10.0kb upstream 10.0kb upstream 18767   true Lsat_1_v8_lg_5: 97804712-97823478 Lactuca sativa
Lsat_1_v5_gn_5_45321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 97813479-97823478 Lactuca sativa
Lsat_1_v5_gn_5_45321 10.0kb downstream 10.0kb downstream 18767   true Lsat_1_v8_lg_5: 97794712-97813478 Lactuca sativa
Lsat_1_v5_gn_5_45321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 97794712-97804711 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467149 5263 Asterids View MSA
123751188 5271 Pentapetalae View MSA
122786187 5272 Eudicot View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain