Gene : Lsat_1_v5_gn_5_44541 L. sativa V8
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  1198
Name:  ? Lsat_1_v5_gn_5_44541 Secondary Identifier:  ? PAC:38967753
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_44541 0.5kb upstream 0.5kb upstream 7868   true Lsat_1_v8_lg_5: 98439685-98447552 Lactuca sativa
Lsat_1_v5_gn_5_44541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 98439685-98440184 Lactuca sativa
Lsat_1_v5_gn_5_44541 0.5kb downstream 0.5kb downstream 7868   true Lsat_1_v8_lg_5: 98440185-98448052 Lactuca sativa
Lsat_1_v5_gn_5_44541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 98447553-98448052 Lactuca sativa
Lsat_1_v5_gn_5_44541 1.0kb upstream 1.0kb upstream 8368   true Lsat_1_v8_lg_5: 98439185-98447552 Lactuca sativa
Lsat_1_v5_gn_5_44541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 98439185-98440184 Lactuca sativa
Lsat_1_v5_gn_5_44541 1.0kb downstream 1.0kb downstream 8368   true Lsat_1_v8_lg_5: 98440185-98448552 Lactuca sativa
Lsat_1_v5_gn_5_44541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 98447553-98448552 Lactuca sativa
Lsat_1_v5_gn_5_44541 2.0kb upstream 2.0kb upstream 9368   true Lsat_1_v8_lg_5: 98438185-98447552 Lactuca sativa
Lsat_1_v5_gn_5_44541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 98438185-98440184 Lactuca sativa
Lsat_1_v5_gn_5_44541 2.0kb downstream 2.0kb downstream 9368   true Lsat_1_v8_lg_5: 98440185-98449552 Lactuca sativa
Lsat_1_v5_gn_5_44541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 98447553-98449552 Lactuca sativa
Lsat_1_v5_gn_5_44541 5.0kb upstream 5.0kb upstream 12368   true Lsat_1_v8_lg_5: 98435185-98447552 Lactuca sativa
Lsat_1_v5_gn_5_44541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 98435185-98440184 Lactuca sativa
Lsat_1_v5_gn_5_44541 5.0kb downstream 5.0kb downstream 12368   true Lsat_1_v8_lg_5: 98440185-98452552 Lactuca sativa
Lsat_1_v5_gn_5_44541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 98447553-98452552 Lactuca sativa
Lsat_1_v5_gn_5_44541 10.0kb upstream 10.0kb upstream 17368   true Lsat_1_v8_lg_5: 98430185-98447552 Lactuca sativa
Lsat_1_v5_gn_5_44541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 98430185-98440184 Lactuca sativa
Lsat_1_v5_gn_5_44541 10.0kb downstream 10.0kb downstream 17368   true Lsat_1_v8_lg_5: 98440185-98457552 Lactuca sativa
Lsat_1_v5_gn_5_44541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 98447553-98457552 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469665 5263 Asterids View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain