Gene : Lsat_1_v5_gn_5_44281 L. sativa V8
Defline:  (1 of 1) 3.5.3.9 - Allantoate deiminase Genomic Order:  1269
Name:  ? Lsat_1_v5_gn_5_44281 Secondary Identifier:  ? PAC:38964860
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5692 Lactuca sativa pathologic  
Lsativa PWY-5698 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_44281 0.5kb upstream 0.5kb upstream 13459   true Lsat_1_v8_lg_5: 109943274-109956732 Lactuca sativa
Lsat_1_v5_gn_5_44281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 109943274-109943773 Lactuca sativa
Lsat_1_v5_gn_5_44281 0.5kb downstream 0.5kb downstream 13459   true Lsat_1_v8_lg_5: 109943774-109957232 Lactuca sativa
Lsat_1_v5_gn_5_44281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 109956733-109957232 Lactuca sativa
Lsat_1_v5_gn_5_44281 1.0kb upstream 1.0kb upstream 13959   true Lsat_1_v8_lg_5: 109942774-109956732 Lactuca sativa
Lsat_1_v5_gn_5_44281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 109942774-109943773 Lactuca sativa
Lsat_1_v5_gn_5_44281 1.0kb downstream 1.0kb downstream 13959   true Lsat_1_v8_lg_5: 109943774-109957732 Lactuca sativa
Lsat_1_v5_gn_5_44281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 109956733-109957732 Lactuca sativa
Lsat_1_v5_gn_5_44281 2.0kb upstream 2.0kb upstream 14959   true Lsat_1_v8_lg_5: 109941774-109956732 Lactuca sativa
Lsat_1_v5_gn_5_44281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 109941774-109943773 Lactuca sativa
Lsat_1_v5_gn_5_44281 2.0kb downstream 2.0kb downstream 14959   true Lsat_1_v8_lg_5: 109943774-109958732 Lactuca sativa
Lsat_1_v5_gn_5_44281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 109956733-109958732 Lactuca sativa
Lsat_1_v5_gn_5_44281 5.0kb upstream 5.0kb upstream 17959   true Lsat_1_v8_lg_5: 109938774-109956732 Lactuca sativa
Lsat_1_v5_gn_5_44281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 109938774-109943773 Lactuca sativa
Lsat_1_v5_gn_5_44281 5.0kb downstream 5.0kb downstream 17959   true Lsat_1_v8_lg_5: 109943774-109961732 Lactuca sativa
Lsat_1_v5_gn_5_44281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 109956733-109961732 Lactuca sativa
Lsat_1_v5_gn_5_44281 10.0kb upstream 10.0kb upstream 22959   true Lsat_1_v8_lg_5: 109933774-109956732 Lactuca sativa
Lsat_1_v5_gn_5_44281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 109933774-109943773 Lactuca sativa
Lsat_1_v5_gn_5_44281 10.0kb downstream 10.0kb downstream 22959   true Lsat_1_v8_lg_5: 109943774-109966732 Lactuca sativa
Lsat_1_v5_gn_5_44281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 109956733-109966732 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468331 5263 Asterids View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain