Gene : Lsat_1_v5_gn_5_4581 L. sativa V8
Defline:  (1 of 1) PTHR33399:SF2 - PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC Genomic Order:  135
Name:  ? Lsat_1_v5_gn_5_4581 Secondary Identifier:  ? PAC:38966823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_4581 0.5kb upstream 0.5kb upstream 1834   true Lsat_1_v8_lg_5: 8655097-8656930 Lactuca sativa
Lsat_1_v5_gn_5_4581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 8655097-8655596 Lactuca sativa
Lsat_1_v5_gn_5_4581 0.5kb downstream 0.5kb downstream 1834   true Lsat_1_v8_lg_5: 8655597-8657430 Lactuca sativa
Lsat_1_v5_gn_5_4581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 8656931-8657430 Lactuca sativa
Lsat_1_v5_gn_5_4581 1.0kb upstream 1.0kb upstream 2334   true Lsat_1_v8_lg_5: 8654597-8656930 Lactuca sativa
Lsat_1_v5_gn_5_4581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 8654597-8655596 Lactuca sativa
Lsat_1_v5_gn_5_4581 1.0kb downstream 1.0kb downstream 2334   true Lsat_1_v8_lg_5: 8655597-8657930 Lactuca sativa
Lsat_1_v5_gn_5_4581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 8656931-8657930 Lactuca sativa
Lsat_1_v5_gn_5_4581 2.0kb upstream 2.0kb upstream 3334   true Lsat_1_v8_lg_5: 8653597-8656930 Lactuca sativa
Lsat_1_v5_gn_5_4581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 8653597-8655596 Lactuca sativa
Lsat_1_v5_gn_5_4581 2.0kb downstream 2.0kb downstream 3334   true Lsat_1_v8_lg_5: 8655597-8658930 Lactuca sativa
Lsat_1_v5_gn_5_4581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 8656931-8658930 Lactuca sativa
Lsat_1_v5_gn_5_4581 5.0kb upstream 5.0kb upstream 6334   true Lsat_1_v8_lg_5: 8650597-8656930 Lactuca sativa
Lsat_1_v5_gn_5_4581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 8650597-8655596 Lactuca sativa
Lsat_1_v5_gn_5_4581 5.0kb downstream 5.0kb downstream 6334   true Lsat_1_v8_lg_5: 8655597-8661930 Lactuca sativa
Lsat_1_v5_gn_5_4581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 8656931-8661930 Lactuca sativa
Lsat_1_v5_gn_5_4581 10.0kb upstream 10.0kb upstream 11334   true Lsat_1_v8_lg_5: 8645597-8656930 Lactuca sativa
Lsat_1_v5_gn_5_4581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 8645597-8655596 Lactuca sativa
Lsat_1_v5_gn_5_4581 10.0kb downstream 10.0kb downstream 11334   true Lsat_1_v8_lg_5: 8655597-8666930 Lactuca sativa
Lsat_1_v5_gn_5_4581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 8656931-8666930 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473086 5263 Asterids View MSA
123739872 5271 Pentapetalae View MSA
122789340 5272 Eudicot View MSA
122046356 5273 Angiosperm View MSA
121310593 5274 Embryophyte View MSA
123348038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain