Gene : Lsat_1_v5_gn_5_48320 L. sativa V8
Defline:  (1 of 1) PTHR10015//PTHR10015:SF186 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED Genomic Order:  1226
Name:  ? Lsat_1_v5_gn_5_48320 Secondary Identifier:  ? PAC:38965197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_48320 0.5kb upstream 0.5kb upstream 2731   true Lsat_1_v8_lg_5: 103240169-103242899 Lactuca sativa
Lsat_1_v5_gn_5_48320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 103240169-103240668 Lactuca sativa
Lsat_1_v5_gn_5_48320 0.5kb downstream 0.5kb downstream 2731   true Lsat_1_v8_lg_5: 103240669-103243399 Lactuca sativa
Lsat_1_v5_gn_5_48320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 103242900-103243399 Lactuca sativa
Lsat_1_v5_gn_5_48320 1.0kb upstream 1.0kb upstream 3231   true Lsat_1_v8_lg_5: 103239669-103242899 Lactuca sativa
Lsat_1_v5_gn_5_48320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 103239669-103240668 Lactuca sativa
Lsat_1_v5_gn_5_48320 1.0kb downstream 1.0kb downstream 3231   true Lsat_1_v8_lg_5: 103240669-103243899 Lactuca sativa
Lsat_1_v5_gn_5_48320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 103242900-103243899 Lactuca sativa
Lsat_1_v5_gn_5_48320 2.0kb upstream 2.0kb upstream 4231   true Lsat_1_v8_lg_5: 103238669-103242899 Lactuca sativa
Lsat_1_v5_gn_5_48320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 103238669-103240668 Lactuca sativa
Lsat_1_v5_gn_5_48320 2.0kb downstream 2.0kb downstream 4231   true Lsat_1_v8_lg_5: 103240669-103244899 Lactuca sativa
Lsat_1_v5_gn_5_48320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 103242900-103244899 Lactuca sativa
Lsat_1_v5_gn_5_48320 5.0kb upstream 5.0kb upstream 7231   true Lsat_1_v8_lg_5: 103235669-103242899 Lactuca sativa
Lsat_1_v5_gn_5_48320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 103235669-103240668 Lactuca sativa
Lsat_1_v5_gn_5_48320 5.0kb downstream 5.0kb downstream 7231   true Lsat_1_v8_lg_5: 103240669-103247899 Lactuca sativa
Lsat_1_v5_gn_5_48320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 103242900-103247899 Lactuca sativa
Lsat_1_v5_gn_5_48320 10.0kb upstream 10.0kb upstream 12231   true Lsat_1_v8_lg_5: 103230669-103242899 Lactuca sativa
Lsat_1_v5_gn_5_48320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 103230669-103240668 Lactuca sativa
Lsat_1_v5_gn_5_48320 10.0kb downstream 10.0kb downstream 12231   true Lsat_1_v8_lg_5: 103240669-103252899 Lactuca sativa
Lsat_1_v5_gn_5_48320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 103242900-103252899 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468530 5263 Asterids View MSA
123737579 5271 Pentapetalae View MSA
122795301 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain