Gene : Lsat_1_v5_gn_5_47461 L. sativa V8
Defline:  (1 of 3) K08955 - ATP-dependent metalloprotease [EC:3.4.24.-] (YME1) Genomic Order:  1208
Name:  ? Lsat_1_v5_gn_5_47461 Secondary Identifier:  ? PAC:38967174
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_47461 0.5kb upstream 0.5kb upstream 6304   true Lsat_1_v8_lg_5: 99986986-99993289 Lactuca sativa
Lsat_1_v5_gn_5_47461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 99986986-99987485 Lactuca sativa
Lsat_1_v5_gn_5_47461 0.5kb downstream 0.5kb downstream 6304   true Lsat_1_v8_lg_5: 99987486-99993789 Lactuca sativa
Lsat_1_v5_gn_5_47461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 99993290-99993789 Lactuca sativa
Lsat_1_v5_gn_5_47461 1.0kb upstream 1.0kb upstream 6804   true Lsat_1_v8_lg_5: 99986486-99993289 Lactuca sativa
Lsat_1_v5_gn_5_47461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 99986486-99987485 Lactuca sativa
Lsat_1_v5_gn_5_47461 1.0kb downstream 1.0kb downstream 6804   true Lsat_1_v8_lg_5: 99987486-99994289 Lactuca sativa
Lsat_1_v5_gn_5_47461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 99993290-99994289 Lactuca sativa
Lsat_1_v5_gn_5_47461 2.0kb upstream 2.0kb upstream 7804   true Lsat_1_v8_lg_5: 99985486-99993289 Lactuca sativa
Lsat_1_v5_gn_5_47461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 99985486-99987485 Lactuca sativa
Lsat_1_v5_gn_5_47461 2.0kb downstream 2.0kb downstream 7804   true Lsat_1_v8_lg_5: 99987486-99995289 Lactuca sativa
Lsat_1_v5_gn_5_47461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 99993290-99995289 Lactuca sativa
Lsat_1_v5_gn_5_47461 5.0kb upstream 5.0kb upstream 10804   true Lsat_1_v8_lg_5: 99982486-99993289 Lactuca sativa
Lsat_1_v5_gn_5_47461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 99982486-99987485 Lactuca sativa
Lsat_1_v5_gn_5_47461 5.0kb downstream 5.0kb downstream 10804   true Lsat_1_v8_lg_5: 99987486-99998289 Lactuca sativa
Lsat_1_v5_gn_5_47461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 99993290-99998289 Lactuca sativa
Lsat_1_v5_gn_5_47461 10.0kb upstream 10.0kb upstream 15804   true Lsat_1_v8_lg_5: 99977486-99993289 Lactuca sativa
Lsat_1_v5_gn_5_47461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 99977486-99987485 Lactuca sativa
Lsat_1_v5_gn_5_47461 10.0kb downstream 10.0kb downstream 15804   true Lsat_1_v8_lg_5: 99987486-100003289 Lactuca sativa
Lsat_1_v5_gn_5_47461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 99993290-100003289 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471088 5263 Asterids View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain