Gene : Lsat_1_v5_gn_5_51980 L. sativa V8
Defline:  (1 of 4) PTHR10110//PTHR10110:SF117 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 1-RELATED Genomic Order:  1369
Name:  ? Lsat_1_v5_gn_5_51980 Secondary Identifier:  ? PAC:38969897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_51980 0.5kb upstream 0.5kb upstream 6904   true Lsat_1_v8_lg_5: 118575759-118582662 Lactuca sativa
Lsat_1_v5_gn_5_51980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 118575759-118576258 Lactuca sativa
Lsat_1_v5_gn_5_51980 0.5kb downstream 0.5kb downstream 6904   true Lsat_1_v8_lg_5: 118576259-118583162 Lactuca sativa
Lsat_1_v5_gn_5_51980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 118582663-118583162 Lactuca sativa
Lsat_1_v5_gn_5_51980 1.0kb upstream 1.0kb upstream 7404   true Lsat_1_v8_lg_5: 118575259-118582662 Lactuca sativa
Lsat_1_v5_gn_5_51980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 118575259-118576258 Lactuca sativa
Lsat_1_v5_gn_5_51980 1.0kb downstream 1.0kb downstream 7404   true Lsat_1_v8_lg_5: 118576259-118583662 Lactuca sativa
Lsat_1_v5_gn_5_51980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 118582663-118583662 Lactuca sativa
Lsat_1_v5_gn_5_51980 2.0kb upstream 2.0kb upstream 8404   true Lsat_1_v8_lg_5: 118574259-118582662 Lactuca sativa
Lsat_1_v5_gn_5_51980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 118574259-118576258 Lactuca sativa
Lsat_1_v5_gn_5_51980 2.0kb downstream 2.0kb downstream 8404   true Lsat_1_v8_lg_5: 118576259-118584662 Lactuca sativa
Lsat_1_v5_gn_5_51980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 118582663-118584662 Lactuca sativa
Lsat_1_v5_gn_5_51980 5.0kb upstream 5.0kb upstream 11404   true Lsat_1_v8_lg_5: 118571259-118582662 Lactuca sativa
Lsat_1_v5_gn_5_51980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 118571259-118576258 Lactuca sativa
Lsat_1_v5_gn_5_51980 5.0kb downstream 5.0kb downstream 11404   true Lsat_1_v8_lg_5: 118576259-118587662 Lactuca sativa
Lsat_1_v5_gn_5_51980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 118582663-118587662 Lactuca sativa
Lsat_1_v5_gn_5_51980 10.0kb upstream 10.0kb upstream 16404   true Lsat_1_v8_lg_5: 118566259-118582662 Lactuca sativa
Lsat_1_v5_gn_5_51980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 118566259-118576258 Lactuca sativa
Lsat_1_v5_gn_5_51980 10.0kb downstream 10.0kb downstream 16404   true Lsat_1_v8_lg_5: 118576259-118592662 Lactuca sativa
Lsat_1_v5_gn_5_51980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 118582663-118592662 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478392 5263 Asterids View MSA
123745225 5271 Pentapetalae View MSA
122787432 5272 Eudicot View MSA
122047449 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain