Gene : Lsat_1_v5_gn_5_52120 L. sativa V8
Defline:  (1 of 2) PF07645//PF08488//PF13947 - Calcium-binding EGF domain (EGF_CA) // Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  1374
Name:  ? Lsat_1_v5_gn_5_52120 Secondary Identifier:  ? PAC:38970138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_52120 0.5kb upstream 0.5kb upstream 1706   true Lsat_1_v8_lg_5: 118747732-118749437 Lactuca sativa
Lsat_1_v5_gn_5_52120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 118747732-118748231 Lactuca sativa
Lsat_1_v5_gn_5_52120 0.5kb downstream 0.5kb downstream 1706   true Lsat_1_v8_lg_5: 118748232-118749937 Lactuca sativa
Lsat_1_v5_gn_5_52120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 118749438-118749937 Lactuca sativa
Lsat_1_v5_gn_5_52120 1.0kb upstream 1.0kb upstream 2206   true Lsat_1_v8_lg_5: 118747232-118749437 Lactuca sativa
Lsat_1_v5_gn_5_52120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 118747232-118748231 Lactuca sativa
Lsat_1_v5_gn_5_52120 1.0kb downstream 1.0kb downstream 2206   true Lsat_1_v8_lg_5: 118748232-118750437 Lactuca sativa
Lsat_1_v5_gn_5_52120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 118749438-118750437 Lactuca sativa
Lsat_1_v5_gn_5_52120 2.0kb upstream 2.0kb upstream 3206   true Lsat_1_v8_lg_5: 118746232-118749437 Lactuca sativa
Lsat_1_v5_gn_5_52120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 118746232-118748231 Lactuca sativa
Lsat_1_v5_gn_5_52120 2.0kb downstream 2.0kb downstream 3206   true Lsat_1_v8_lg_5: 118748232-118751437 Lactuca sativa
Lsat_1_v5_gn_5_52120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 118749438-118751437 Lactuca sativa
Lsat_1_v5_gn_5_52120 5.0kb upstream 5.0kb upstream 6206   true Lsat_1_v8_lg_5: 118743232-118749437 Lactuca sativa
Lsat_1_v5_gn_5_52120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 118743232-118748231 Lactuca sativa
Lsat_1_v5_gn_5_52120 5.0kb downstream 5.0kb downstream 6206   true Lsat_1_v8_lg_5: 118748232-118754437 Lactuca sativa
Lsat_1_v5_gn_5_52120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 118749438-118754437 Lactuca sativa
Lsat_1_v5_gn_5_52120 10.0kb upstream 10.0kb upstream 11206   true Lsat_1_v8_lg_5: 118738232-118749437 Lactuca sativa
Lsat_1_v5_gn_5_52120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 118738232-118748231 Lactuca sativa
Lsat_1_v5_gn_5_52120 10.0kb downstream 10.0kb downstream 11206   true Lsat_1_v8_lg_5: 118748232-118759437 Lactuca sativa
Lsat_1_v5_gn_5_52120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 118749438-118759437 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469268 5263 Asterids View MSA
123751004 5271 Pentapetalae View MSA
122794811 5272 Eudicot View MSA
122051146 5273 Angiosperm View MSA
121312314 5274 Embryophyte View MSA
123349498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain