Gene : Lsat_1_v5_gn_5_53060 L. sativa V8
Defline:  (1 of 3) K01870 - isoleucyl-tRNA synthetase (IARS, ileS) Genomic Order:  1405
Name:  ? Lsat_1_v5_gn_5_53060 Secondary Identifier:  ? PAC:38967329
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_53060 0.5kb upstream 0.5kb upstream 9309   true Lsat_1_v8_lg_5: 122142933-122152241 Lactuca sativa
Lsat_1_v5_gn_5_53060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 122142933-122143432 Lactuca sativa
Lsat_1_v5_gn_5_53060 0.5kb downstream 0.5kb downstream 9309   true Lsat_1_v8_lg_5: 122143433-122152741 Lactuca sativa
Lsat_1_v5_gn_5_53060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 122152242-122152741 Lactuca sativa
Lsat_1_v5_gn_5_53060 1.0kb upstream 1.0kb upstream 9809   true Lsat_1_v8_lg_5: 122142433-122152241 Lactuca sativa
Lsat_1_v5_gn_5_53060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 122142433-122143432 Lactuca sativa
Lsat_1_v5_gn_5_53060 1.0kb downstream 1.0kb downstream 9809   true Lsat_1_v8_lg_5: 122143433-122153241 Lactuca sativa
Lsat_1_v5_gn_5_53060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 122152242-122153241 Lactuca sativa
Lsat_1_v5_gn_5_53060 2.0kb upstream 2.0kb upstream 10809   true Lsat_1_v8_lg_5: 122141433-122152241 Lactuca sativa
Lsat_1_v5_gn_5_53060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 122141433-122143432 Lactuca sativa
Lsat_1_v5_gn_5_53060 2.0kb downstream 2.0kb downstream 10809   true Lsat_1_v8_lg_5: 122143433-122154241 Lactuca sativa
Lsat_1_v5_gn_5_53060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 122152242-122154241 Lactuca sativa
Lsat_1_v5_gn_5_53060 5.0kb upstream 5.0kb upstream 13809   true Lsat_1_v8_lg_5: 122138433-122152241 Lactuca sativa
Lsat_1_v5_gn_5_53060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 122138433-122143432 Lactuca sativa
Lsat_1_v5_gn_5_53060 5.0kb downstream 5.0kb downstream 13809   true Lsat_1_v8_lg_5: 122143433-122157241 Lactuca sativa
Lsat_1_v5_gn_5_53060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 122152242-122157241 Lactuca sativa
Lsat_1_v5_gn_5_53060 10.0kb upstream 10.0kb upstream 18809   true Lsat_1_v8_lg_5: 122133433-122152241 Lactuca sativa
Lsat_1_v5_gn_5_53060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 122133433-122143432 Lactuca sativa
Lsat_1_v5_gn_5_53060 10.0kb downstream 10.0kb downstream 18809   true Lsat_1_v8_lg_5: 122143433-122162241 Lactuca sativa
Lsat_1_v5_gn_5_53060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 122152242-122162241 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474846 5263 Asterids View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain