Gene : Lsat_1_v5_gn_5_540 L. sativa V8
Defline:  (1 of 1) K16616 - actin-related protein 8, plant (PARP8) Genomic Order:  8
Name:  ? Lsat_1_v5_gn_5_540 Secondary Identifier:  ? PAC:38964047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_540 0.5kb upstream 0.5kb upstream 4316   true Lsat_1_v8_lg_5: 237548-241863 Lactuca sativa
Lsat_1_v5_gn_5_540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 241364-241863 Lactuca sativa
Lsat_1_v5_gn_5_540 0.5kb downstream 0.5kb downstream 4316   true Lsat_1_v8_lg_5: 237048-241363 Lactuca sativa
Lsat_1_v5_gn_5_540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 237048-237547 Lactuca sativa
Lsat_1_v5_gn_5_540 1.0kb upstream 1.0kb upstream 4816   true Lsat_1_v8_lg_5: 237548-242363 Lactuca sativa
Lsat_1_v5_gn_5_540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 241364-242363 Lactuca sativa
Lsat_1_v5_gn_5_540 1.0kb downstream 1.0kb downstream 4816   true Lsat_1_v8_lg_5: 236548-241363 Lactuca sativa
Lsat_1_v5_gn_5_540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 236548-237547 Lactuca sativa
Lsat_1_v5_gn_5_540 2.0kb upstream 2.0kb upstream 5816   true Lsat_1_v8_lg_5: 237548-243363 Lactuca sativa
Lsat_1_v5_gn_5_540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 241364-243363 Lactuca sativa
Lsat_1_v5_gn_5_540 2.0kb downstream 2.0kb downstream 5816   true Lsat_1_v8_lg_5: 235548-241363 Lactuca sativa
Lsat_1_v5_gn_5_540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 235548-237547 Lactuca sativa
Lsat_1_v5_gn_5_540 5.0kb upstream 5.0kb upstream 8816   true Lsat_1_v8_lg_5: 237548-246363 Lactuca sativa
Lsat_1_v5_gn_5_540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 241364-246363 Lactuca sativa
Lsat_1_v5_gn_5_540 5.0kb downstream 5.0kb downstream 8816   true Lsat_1_v8_lg_5: 232548-241363 Lactuca sativa
Lsat_1_v5_gn_5_540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 232548-237547 Lactuca sativa
Lsat_1_v5_gn_5_540 10.0kb upstream 10.0kb upstream 13816   true Lsat_1_v8_lg_5: 237548-251363 Lactuca sativa
Lsat_1_v5_gn_5_540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 241364-251363 Lactuca sativa
Lsat_1_v5_gn_5_540 10.0kb downstream 10.0kb downstream 13816   true Lsat_1_v8_lg_5: 227548-241363 Lactuca sativa
Lsat_1_v5_gn_5_540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 227548-237547 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466653 5263 Asterids View MSA
123744572 5271 Pentapetalae View MSA
122792613 5272 Eudicot View MSA
122045785 5273 Angiosperm View MSA
121310502 5274 Embryophyte View MSA
123347970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain