Gene : Lsat_1_v5_gn_5_56460 L. sativa V8
Defline:  (1 of 1) K02738 - 20S proteasome subunit beta 1 (PSMB6) Genomic Order:  1473
Name:  ? Lsat_1_v5_gn_5_56460 Secondary Identifier:  ? PAC:38964826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_56460 0.5kb upstream 0.5kb upstream 3144   true Lsat_1_v8_lg_5: 128330298-128333441 Lactuca sativa
Lsat_1_v5_gn_5_56460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 128330298-128330797 Lactuca sativa
Lsat_1_v5_gn_5_56460 0.5kb downstream 0.5kb downstream 3144   true Lsat_1_v8_lg_5: 128330798-128333941 Lactuca sativa
Lsat_1_v5_gn_5_56460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 128333442-128333941 Lactuca sativa
Lsat_1_v5_gn_5_56460 1.0kb upstream 1.0kb upstream 3644   true Lsat_1_v8_lg_5: 128329798-128333441 Lactuca sativa
Lsat_1_v5_gn_5_56460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 128329798-128330797 Lactuca sativa
Lsat_1_v5_gn_5_56460 1.0kb downstream 1.0kb downstream 3644   true Lsat_1_v8_lg_5: 128330798-128334441 Lactuca sativa
Lsat_1_v5_gn_5_56460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 128333442-128334441 Lactuca sativa
Lsat_1_v5_gn_5_56460 2.0kb upstream 2.0kb upstream 4644   true Lsat_1_v8_lg_5: 128328798-128333441 Lactuca sativa
Lsat_1_v5_gn_5_56460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 128328798-128330797 Lactuca sativa
Lsat_1_v5_gn_5_56460 2.0kb downstream 2.0kb downstream 4644   true Lsat_1_v8_lg_5: 128330798-128335441 Lactuca sativa
Lsat_1_v5_gn_5_56460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 128333442-128335441 Lactuca sativa
Lsat_1_v5_gn_5_56460 5.0kb upstream 5.0kb upstream 7644   true Lsat_1_v8_lg_5: 128325798-128333441 Lactuca sativa
Lsat_1_v5_gn_5_56460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 128325798-128330797 Lactuca sativa
Lsat_1_v5_gn_5_56460 5.0kb downstream 5.0kb downstream 7644   true Lsat_1_v8_lg_5: 128330798-128338441 Lactuca sativa
Lsat_1_v5_gn_5_56460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 128333442-128338441 Lactuca sativa
Lsat_1_v5_gn_5_56460 10.0kb upstream 10.0kb upstream 12644   true Lsat_1_v8_lg_5: 128320798-128333441 Lactuca sativa
Lsat_1_v5_gn_5_56460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 128320798-128330797 Lactuca sativa
Lsat_1_v5_gn_5_56460 10.0kb downstream 10.0kb downstream 12644   true Lsat_1_v8_lg_5: 128330798-128343441 Lactuca sativa
Lsat_1_v5_gn_5_56460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 128333442-128343441 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477425 5263 Asterids View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain