Gene : Lsat_1_v5_gn_5_56441 L. sativa V8
Defline:  (1 of 17) PF00069//PF08263 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  1487
Name:  ? Lsat_1_v5_gn_5_56441 Secondary Identifier:  ? PAC:38965107
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_56441 0.5kb upstream 0.5kb upstream 3707   true Lsat_1_v8_lg_5: 129621188-129624894 Lactuca sativa
Lsat_1_v5_gn_5_56441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 129621188-129621687 Lactuca sativa
Lsat_1_v5_gn_5_56441 0.5kb downstream 0.5kb downstream 3707   true Lsat_1_v8_lg_5: 129621688-129625394 Lactuca sativa
Lsat_1_v5_gn_5_56441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 129624895-129625394 Lactuca sativa
Lsat_1_v5_gn_5_56441 1.0kb upstream 1.0kb upstream 4207   true Lsat_1_v8_lg_5: 129620688-129624894 Lactuca sativa
Lsat_1_v5_gn_5_56441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 129620688-129621687 Lactuca sativa
Lsat_1_v5_gn_5_56441 1.0kb downstream 1.0kb downstream 4207   true Lsat_1_v8_lg_5: 129621688-129625894 Lactuca sativa
Lsat_1_v5_gn_5_56441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 129624895-129625894 Lactuca sativa
Lsat_1_v5_gn_5_56441 2.0kb upstream 2.0kb upstream 5207   true Lsat_1_v8_lg_5: 129619688-129624894 Lactuca sativa
Lsat_1_v5_gn_5_56441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 129619688-129621687 Lactuca sativa
Lsat_1_v5_gn_5_56441 2.0kb downstream 2.0kb downstream 5207   true Lsat_1_v8_lg_5: 129621688-129626894 Lactuca sativa
Lsat_1_v5_gn_5_56441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 129624895-129626894 Lactuca sativa
Lsat_1_v5_gn_5_56441 5.0kb upstream 5.0kb upstream 8207   true Lsat_1_v8_lg_5: 129616688-129624894 Lactuca sativa
Lsat_1_v5_gn_5_56441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 129616688-129621687 Lactuca sativa
Lsat_1_v5_gn_5_56441 5.0kb downstream 5.0kb downstream 8207   true Lsat_1_v8_lg_5: 129621688-129629894 Lactuca sativa
Lsat_1_v5_gn_5_56441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 129624895-129629894 Lactuca sativa
Lsat_1_v5_gn_5_56441 10.0kb upstream 10.0kb upstream 13207   true Lsat_1_v8_lg_5: 129611688-129624894 Lactuca sativa
Lsat_1_v5_gn_5_56441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 129611688-129621687 Lactuca sativa
Lsat_1_v5_gn_5_56441 10.0kb downstream 10.0kb downstream 13207   true Lsat_1_v8_lg_5: 129621688-129634894 Lactuca sativa
Lsat_1_v5_gn_5_56441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 129624895-129634894 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473837 5263 Asterids View MSA
123750031 5271 Pentapetalae View MSA
122795322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain