Gene : Lsat_1_v5_gn_5_5821 L. sativa V8
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  157
Name:  ? Lsat_1_v5_gn_5_5821 Secondary Identifier:  ? PAC:38965962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_5821 0.5kb upstream 0.5kb upstream 2222   true Lsat_1_v8_lg_5: 9969117-9971338 Lactuca sativa
Lsat_1_v5_gn_5_5821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 9970839-9971338 Lactuca sativa
Lsat_1_v5_gn_5_5821 0.5kb downstream 0.5kb downstream 2222   true Lsat_1_v8_lg_5: 9968617-9970838 Lactuca sativa
Lsat_1_v5_gn_5_5821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 9968617-9969116 Lactuca sativa
Lsat_1_v5_gn_5_5821 1.0kb upstream 1.0kb upstream 2722   true Lsat_1_v8_lg_5: 9969117-9971838 Lactuca sativa
Lsat_1_v5_gn_5_5821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 9970839-9971838 Lactuca sativa
Lsat_1_v5_gn_5_5821 1.0kb downstream 1.0kb downstream 2722   true Lsat_1_v8_lg_5: 9968117-9970838 Lactuca sativa
Lsat_1_v5_gn_5_5821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 9968117-9969116 Lactuca sativa
Lsat_1_v5_gn_5_5821 2.0kb upstream 2.0kb upstream 3722   true Lsat_1_v8_lg_5: 9969117-9972838 Lactuca sativa
Lsat_1_v5_gn_5_5821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 9970839-9972838 Lactuca sativa
Lsat_1_v5_gn_5_5821 2.0kb downstream 2.0kb downstream 3722   true Lsat_1_v8_lg_5: 9967117-9970838 Lactuca sativa
Lsat_1_v5_gn_5_5821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 9967117-9969116 Lactuca sativa
Lsat_1_v5_gn_5_5821 5.0kb upstream 5.0kb upstream 6722   true Lsat_1_v8_lg_5: 9969117-9975838 Lactuca sativa
Lsat_1_v5_gn_5_5821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 9970839-9975838 Lactuca sativa
Lsat_1_v5_gn_5_5821 5.0kb downstream 5.0kb downstream 6722   true Lsat_1_v8_lg_5: 9964117-9970838 Lactuca sativa
Lsat_1_v5_gn_5_5821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 9964117-9969116 Lactuca sativa
Lsat_1_v5_gn_5_5821 10.0kb upstream 10.0kb upstream 11722   true Lsat_1_v8_lg_5: 9969117-9980838 Lactuca sativa
Lsat_1_v5_gn_5_5821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 9970839-9980838 Lactuca sativa
Lsat_1_v5_gn_5_5821 10.0kb downstream 10.0kb downstream 11722   true Lsat_1_v8_lg_5: 9959117-9970838 Lactuca sativa
Lsat_1_v5_gn_5_5821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 9959117-9969116 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481924 5263 Asterids View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain