Gene : Lsat_1_v5_gn_5_58820 L. sativa V8
Defline:  (1 of 1) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1555
Name:  ? Lsat_1_v5_gn_5_58820 Secondary Identifier:  ? PAC:38971745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_58820 0.5kb upstream 0.5kb upstream 4137   true Lsat_1_v8_lg_5: 135557285-135561421 Lactuca sativa
Lsat_1_v5_gn_5_58820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 135557285-135557784 Lactuca sativa
Lsat_1_v5_gn_5_58820 0.5kb downstream 0.5kb downstream 4137   true Lsat_1_v8_lg_5: 135557785-135561921 Lactuca sativa
Lsat_1_v5_gn_5_58820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 135561422-135561921 Lactuca sativa
Lsat_1_v5_gn_5_58820 1.0kb upstream 1.0kb upstream 4637   true Lsat_1_v8_lg_5: 135556785-135561421 Lactuca sativa
Lsat_1_v5_gn_5_58820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 135556785-135557784 Lactuca sativa
Lsat_1_v5_gn_5_58820 1.0kb downstream 1.0kb downstream 4637   true Lsat_1_v8_lg_5: 135557785-135562421 Lactuca sativa
Lsat_1_v5_gn_5_58820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 135561422-135562421 Lactuca sativa
Lsat_1_v5_gn_5_58820 2.0kb upstream 2.0kb upstream 5637   true Lsat_1_v8_lg_5: 135555785-135561421 Lactuca sativa
Lsat_1_v5_gn_5_58820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 135555785-135557784 Lactuca sativa
Lsat_1_v5_gn_5_58820 2.0kb downstream 2.0kb downstream 5637   true Lsat_1_v8_lg_5: 135557785-135563421 Lactuca sativa
Lsat_1_v5_gn_5_58820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 135561422-135563421 Lactuca sativa
Lsat_1_v5_gn_5_58820 5.0kb upstream 5.0kb upstream 8637   true Lsat_1_v8_lg_5: 135552785-135561421 Lactuca sativa
Lsat_1_v5_gn_5_58820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 135552785-135557784 Lactuca sativa
Lsat_1_v5_gn_5_58820 5.0kb downstream 5.0kb downstream 8637   true Lsat_1_v8_lg_5: 135557785-135566421 Lactuca sativa
Lsat_1_v5_gn_5_58820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 135561422-135566421 Lactuca sativa
Lsat_1_v5_gn_5_58820 10.0kb upstream 10.0kb upstream 13637   true Lsat_1_v8_lg_5: 135547785-135561421 Lactuca sativa
Lsat_1_v5_gn_5_58820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 135547785-135557784 Lactuca sativa
Lsat_1_v5_gn_5_58820 10.0kb downstream 10.0kb downstream 13637   true Lsat_1_v8_lg_5: 135557785-135571421 Lactuca sativa
Lsat_1_v5_gn_5_58820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 135561422-135571421 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029163 5273 Angiosperm View MSA
121474218 5263 Asterids View MSA
123747732 5271 Pentapetalae View MSA
122794989 5272 Eudicot View MSA
123428913 5275 Viridiplantae View MSA
121298544 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain