Gene : Lsat_1_v5_gn_5_19381 L. sativa V8
Defline:  (1 of 1) PTHR12300//PTHR12300:SF52//PTHR22870//PTHR22870:SF219//PTHR23042//PTHR23042:SF51 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN A-RELATED // REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN-RELATED // CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR BHLH47 Genomic Order:  538
Name:  ? Lsat_1_v5_gn_5_19381 Secondary Identifier:  ? PAC:38963631
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_19381 0.5kb upstream 0.5kb upstream 9126   true Lsat_1_v8_lg_5: 39359493-39368618 Lactuca sativa
Lsat_1_v5_gn_5_19381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 39368119-39368618 Lactuca sativa
Lsat_1_v5_gn_5_19381 0.5kb downstream 0.5kb downstream 9126   true Lsat_1_v8_lg_5: 39358993-39368118 Lactuca sativa
Lsat_1_v5_gn_5_19381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 39358993-39359492 Lactuca sativa
Lsat_1_v5_gn_5_19381 1.0kb upstream 1.0kb upstream 9626   true Lsat_1_v8_lg_5: 39359493-39369118 Lactuca sativa
Lsat_1_v5_gn_5_19381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 39368119-39369118 Lactuca sativa
Lsat_1_v5_gn_5_19381 1.0kb downstream 1.0kb downstream 9626   true Lsat_1_v8_lg_5: 39358493-39368118 Lactuca sativa
Lsat_1_v5_gn_5_19381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 39358493-39359492 Lactuca sativa
Lsat_1_v5_gn_5_19381 2.0kb upstream 2.0kb upstream 10626   true Lsat_1_v8_lg_5: 39359493-39370118 Lactuca sativa
Lsat_1_v5_gn_5_19381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 39368119-39370118 Lactuca sativa
Lsat_1_v5_gn_5_19381 2.0kb downstream 2.0kb downstream 10626   true Lsat_1_v8_lg_5: 39357493-39368118 Lactuca sativa
Lsat_1_v5_gn_5_19381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 39357493-39359492 Lactuca sativa
Lsat_1_v5_gn_5_19381 5.0kb upstream 5.0kb upstream 13626   true Lsat_1_v8_lg_5: 39359493-39373118 Lactuca sativa
Lsat_1_v5_gn_5_19381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 39368119-39373118 Lactuca sativa
Lsat_1_v5_gn_5_19381 5.0kb downstream 5.0kb downstream 13626   true Lsat_1_v8_lg_5: 39354493-39368118 Lactuca sativa
Lsat_1_v5_gn_5_19381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 39354493-39359492 Lactuca sativa
Lsat_1_v5_gn_5_19381 10.0kb upstream 10.0kb upstream 18626   true Lsat_1_v8_lg_5: 39359493-39378118 Lactuca sativa
Lsat_1_v5_gn_5_19381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 39368119-39378118 Lactuca sativa
Lsat_1_v5_gn_5_19381 10.0kb downstream 10.0kb downstream 18626   true Lsat_1_v8_lg_5: 39349493-39368118 Lactuca sativa
Lsat_1_v5_gn_5_19381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 39349493-39359492 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479497 5263 Asterids View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain