Gene : Lsat_1_v5_gn_5_20801 L. sativa V8
Defline:  (1 of 2) KOG3292 - Predicted membrane protein Genomic Order:  581
Name:  ? Lsat_1_v5_gn_5_20801 Secondary Identifier:  ? PAC:38964507
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_20801 0.5kb upstream 0.5kb upstream 2382   true Lsat_1_v8_lg_5: 43554209-43556590 Lactuca sativa
Lsat_1_v5_gn_5_20801 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 43554209-43554708 Lactuca sativa
Lsat_1_v5_gn_5_20801 0.5kb downstream 0.5kb downstream 2382   true Lsat_1_v8_lg_5: 43554709-43557090 Lactuca sativa
Lsat_1_v5_gn_5_20801 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 43556591-43557090 Lactuca sativa
Lsat_1_v5_gn_5_20801 1.0kb upstream 1.0kb upstream 2882   true Lsat_1_v8_lg_5: 43553709-43556590 Lactuca sativa
Lsat_1_v5_gn_5_20801 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 43553709-43554708 Lactuca sativa
Lsat_1_v5_gn_5_20801 1.0kb downstream 1.0kb downstream 2882   true Lsat_1_v8_lg_5: 43554709-43557590 Lactuca sativa
Lsat_1_v5_gn_5_20801 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 43556591-43557590 Lactuca sativa
Lsat_1_v5_gn_5_20801 2.0kb upstream 2.0kb upstream 3882   true Lsat_1_v8_lg_5: 43552709-43556590 Lactuca sativa
Lsat_1_v5_gn_5_20801 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 43552709-43554708 Lactuca sativa
Lsat_1_v5_gn_5_20801 2.0kb downstream 2.0kb downstream 3882   true Lsat_1_v8_lg_5: 43554709-43558590 Lactuca sativa
Lsat_1_v5_gn_5_20801 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 43556591-43558590 Lactuca sativa
Lsat_1_v5_gn_5_20801 5.0kb upstream 5.0kb upstream 6882   true Lsat_1_v8_lg_5: 43549709-43556590 Lactuca sativa
Lsat_1_v5_gn_5_20801 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 43549709-43554708 Lactuca sativa
Lsat_1_v5_gn_5_20801 5.0kb downstream 5.0kb downstream 6882   true Lsat_1_v8_lg_5: 43554709-43561590 Lactuca sativa
Lsat_1_v5_gn_5_20801 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 43556591-43561590 Lactuca sativa
Lsat_1_v5_gn_5_20801 10.0kb upstream 10.0kb upstream 11882   true Lsat_1_v8_lg_5: 43544709-43556590 Lactuca sativa
Lsat_1_v5_gn_5_20801 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 43544709-43554708 Lactuca sativa
Lsat_1_v5_gn_5_20801 10.0kb downstream 10.0kb downstream 11882   true Lsat_1_v8_lg_5: 43554709-43566590 Lactuca sativa
Lsat_1_v5_gn_5_20801 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 43556591-43566590 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
121473574 5263 Asterids View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain