Gene : Lsat_1_v5_gn_5_19740 L. sativa V8
Defline:  (1 of 1) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  560
Name:  ? Lsat_1_v5_gn_5_19740 Secondary Identifier:  ? PAC:38970266
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa LIPAS-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_19740 0.5kb upstream 0.5kb upstream 2185   true Lsat_1_v8_lg_5: 41983020-41985204 Lactuca sativa
Lsat_1_v5_gn_5_19740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 41984705-41985204 Lactuca sativa
Lsat_1_v5_gn_5_19740 0.5kb downstream 0.5kb downstream 2185   true Lsat_1_v8_lg_5: 41982520-41984704 Lactuca sativa
Lsat_1_v5_gn_5_19740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 41982520-41983019 Lactuca sativa
Lsat_1_v5_gn_5_19740 1.0kb upstream 1.0kb upstream 2685   true Lsat_1_v8_lg_5: 41983020-41985704 Lactuca sativa
Lsat_1_v5_gn_5_19740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 41984705-41985704 Lactuca sativa
Lsat_1_v5_gn_5_19740 1.0kb downstream 1.0kb downstream 2685   true Lsat_1_v8_lg_5: 41982020-41984704 Lactuca sativa
Lsat_1_v5_gn_5_19740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 41982020-41983019 Lactuca sativa
Lsat_1_v5_gn_5_19740 2.0kb upstream 2.0kb upstream 3685   true Lsat_1_v8_lg_5: 41983020-41986704 Lactuca sativa
Lsat_1_v5_gn_5_19740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 41984705-41986704 Lactuca sativa
Lsat_1_v5_gn_5_19740 2.0kb downstream 2.0kb downstream 3685   true Lsat_1_v8_lg_5: 41981020-41984704 Lactuca sativa
Lsat_1_v5_gn_5_19740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 41981020-41983019 Lactuca sativa
Lsat_1_v5_gn_5_19740 5.0kb upstream 5.0kb upstream 6685   true Lsat_1_v8_lg_5: 41983020-41989704 Lactuca sativa
Lsat_1_v5_gn_5_19740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 41984705-41989704 Lactuca sativa
Lsat_1_v5_gn_5_19740 5.0kb downstream 5.0kb downstream 6685   true Lsat_1_v8_lg_5: 41978020-41984704 Lactuca sativa
Lsat_1_v5_gn_5_19740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 41978020-41983019 Lactuca sativa
Lsat_1_v5_gn_5_19740 10.0kb upstream 10.0kb upstream 11685   true Lsat_1_v8_lg_5: 41983020-41994704 Lactuca sativa
Lsat_1_v5_gn_5_19740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 41984705-41994704 Lactuca sativa
Lsat_1_v5_gn_5_19740 10.0kb downstream 10.0kb downstream 11685   true Lsat_1_v8_lg_5: 41973020-41984704 Lactuca sativa
Lsat_1_v5_gn_5_19740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 41973020-41983019 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474293 5263 Asterids View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain