Gene : Lsat_1_v5_gn_5_22961 L. sativa V8
Defline:  (1 of 5) K18635 - protein SPIRAL1 and related proteins (SPR1) Genomic Order:  640
Name:  ? Lsat_1_v5_gn_5_22961 Secondary Identifier:  ? PAC:38969716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_22961 0.5kb upstream 0.5kb upstream 2481   true Lsat_1_v8_lg_5: 46716053-46718533 Lactuca sativa
Lsat_1_v5_gn_5_22961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 46716053-46716552 Lactuca sativa
Lsat_1_v5_gn_5_22961 0.5kb downstream 0.5kb downstream 2481   true Lsat_1_v8_lg_5: 46716553-46719033 Lactuca sativa
Lsat_1_v5_gn_5_22961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 46718534-46719033 Lactuca sativa
Lsat_1_v5_gn_5_22961 1.0kb upstream 1.0kb upstream 2981   true Lsat_1_v8_lg_5: 46715553-46718533 Lactuca sativa
Lsat_1_v5_gn_5_22961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 46715553-46716552 Lactuca sativa
Lsat_1_v5_gn_5_22961 1.0kb downstream 1.0kb downstream 2981   true Lsat_1_v8_lg_5: 46716553-46719533 Lactuca sativa
Lsat_1_v5_gn_5_22961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 46718534-46719533 Lactuca sativa
Lsat_1_v5_gn_5_22961 2.0kb upstream 2.0kb upstream 3981   true Lsat_1_v8_lg_5: 46714553-46718533 Lactuca sativa
Lsat_1_v5_gn_5_22961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 46714553-46716552 Lactuca sativa
Lsat_1_v5_gn_5_22961 2.0kb downstream 2.0kb downstream 3981   true Lsat_1_v8_lg_5: 46716553-46720533 Lactuca sativa
Lsat_1_v5_gn_5_22961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 46718534-46720533 Lactuca sativa
Lsat_1_v5_gn_5_22961 5.0kb upstream 5.0kb upstream 6981   true Lsat_1_v8_lg_5: 46711553-46718533 Lactuca sativa
Lsat_1_v5_gn_5_22961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 46711553-46716552 Lactuca sativa
Lsat_1_v5_gn_5_22961 5.0kb downstream 5.0kb downstream 6981   true Lsat_1_v8_lg_5: 46716553-46723533 Lactuca sativa
Lsat_1_v5_gn_5_22961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 46718534-46723533 Lactuca sativa
Lsat_1_v5_gn_5_22961 10.0kb upstream 10.0kb upstream 11981   true Lsat_1_v8_lg_5: 46706553-46718533 Lactuca sativa
Lsat_1_v5_gn_5_22961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 46706553-46716552 Lactuca sativa
Lsat_1_v5_gn_5_22961 10.0kb downstream 10.0kb downstream 11981   true Lsat_1_v8_lg_5: 46716553-46728533 Lactuca sativa
Lsat_1_v5_gn_5_22961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 46718534-46728533 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469283 5263 Asterids View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain