Gene : Lsat_1_v5_gn_5_22440 L. sativa V8
Defline:  (1 of 1) K01126 - glycerophosphoryl diester phosphodiesterase (E3.1.4.46, glpQ, ugpQ) Genomic Order:  635
Name:  ? Lsat_1_v5_gn_5_22440 Secondary Identifier:  ? PAC:38968986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7409 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_22440 0.5kb upstream 0.5kb upstream 3755   true Lsat_1_v8_lg_5: 46350040-46353794 Lactuca sativa
Lsat_1_v5_gn_5_22440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 46353295-46353794 Lactuca sativa
Lsat_1_v5_gn_5_22440 0.5kb downstream 0.5kb downstream 3755   true Lsat_1_v8_lg_5: 46349540-46353294 Lactuca sativa
Lsat_1_v5_gn_5_22440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 46349540-46350039 Lactuca sativa
Lsat_1_v5_gn_5_22440 1.0kb upstream 1.0kb upstream 4255   true Lsat_1_v8_lg_5: 46350040-46354294 Lactuca sativa
Lsat_1_v5_gn_5_22440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 46353295-46354294 Lactuca sativa
Lsat_1_v5_gn_5_22440 1.0kb downstream 1.0kb downstream 4255   true Lsat_1_v8_lg_5: 46349040-46353294 Lactuca sativa
Lsat_1_v5_gn_5_22440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 46349040-46350039 Lactuca sativa
Lsat_1_v5_gn_5_22440 2.0kb upstream 2.0kb upstream 5255   true Lsat_1_v8_lg_5: 46350040-46355294 Lactuca sativa
Lsat_1_v5_gn_5_22440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 46353295-46355294 Lactuca sativa
Lsat_1_v5_gn_5_22440 2.0kb downstream 2.0kb downstream 5255   true Lsat_1_v8_lg_5: 46348040-46353294 Lactuca sativa
Lsat_1_v5_gn_5_22440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 46348040-46350039 Lactuca sativa
Lsat_1_v5_gn_5_22440 5.0kb upstream 5.0kb upstream 8255   true Lsat_1_v8_lg_5: 46350040-46358294 Lactuca sativa
Lsat_1_v5_gn_5_22440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 46353295-46358294 Lactuca sativa
Lsat_1_v5_gn_5_22440 5.0kb downstream 5.0kb downstream 8255   true Lsat_1_v8_lg_5: 46345040-46353294 Lactuca sativa
Lsat_1_v5_gn_5_22440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 46345040-46350039 Lactuca sativa
Lsat_1_v5_gn_5_22440 10.0kb upstream 10.0kb upstream 13255   true Lsat_1_v8_lg_5: 46350040-46363294 Lactuca sativa
Lsat_1_v5_gn_5_22440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 46353295-46363294 Lactuca sativa
Lsat_1_v5_gn_5_22440 10.0kb downstream 10.0kb downstream 13255   true Lsat_1_v8_lg_5: 46340040-46353294 Lactuca sativa
Lsat_1_v5_gn_5_22440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 46340040-46350039 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468404 5263 Asterids View MSA
123737505 5271 Pentapetalae View MSA
122790009 5272 Eudicot View MSA
122046255 5273 Angiosperm View MSA
121345517 5274 Embryophyte View MSA
123425927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain