Gene : Lsat_1_v5_gn_5_23380 L. sativa V8
Defline:  (1 of 1) PTHR35502:SF2 - MOVEMENT PROTEIN BINDING PROTEIN 2C Genomic Order:  649
Name:  ? Lsat_1_v5_gn_5_23380 Secondary Identifier:  ? PAC:38964122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_23380 0.5kb upstream 0.5kb upstream 2606   true Lsat_1_v8_lg_5: 48093216-48095821 Lactuca sativa
Lsat_1_v5_gn_5_23380 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 48093216-48093715 Lactuca sativa
Lsat_1_v5_gn_5_23380 0.5kb downstream 0.5kb downstream 2606   true Lsat_1_v8_lg_5: 48093716-48096321 Lactuca sativa
Lsat_1_v5_gn_5_23380 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 48095822-48096321 Lactuca sativa
Lsat_1_v5_gn_5_23380 1.0kb upstream 1.0kb upstream 3106   true Lsat_1_v8_lg_5: 48092716-48095821 Lactuca sativa
Lsat_1_v5_gn_5_23380 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 48092716-48093715 Lactuca sativa
Lsat_1_v5_gn_5_23380 1.0kb downstream 1.0kb downstream 3106   true Lsat_1_v8_lg_5: 48093716-48096821 Lactuca sativa
Lsat_1_v5_gn_5_23380 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 48095822-48096821 Lactuca sativa
Lsat_1_v5_gn_5_23380 2.0kb upstream 2.0kb upstream 4106   true Lsat_1_v8_lg_5: 48091716-48095821 Lactuca sativa
Lsat_1_v5_gn_5_23380 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 48091716-48093715 Lactuca sativa
Lsat_1_v5_gn_5_23380 2.0kb downstream 2.0kb downstream 4106   true Lsat_1_v8_lg_5: 48093716-48097821 Lactuca sativa
Lsat_1_v5_gn_5_23380 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 48095822-48097821 Lactuca sativa
Lsat_1_v5_gn_5_23380 5.0kb upstream 5.0kb upstream 7106   true Lsat_1_v8_lg_5: 48088716-48095821 Lactuca sativa
Lsat_1_v5_gn_5_23380 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 48088716-48093715 Lactuca sativa
Lsat_1_v5_gn_5_23380 5.0kb downstream 5.0kb downstream 7106   true Lsat_1_v8_lg_5: 48093716-48100821 Lactuca sativa
Lsat_1_v5_gn_5_23380 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 48095822-48100821 Lactuca sativa
Lsat_1_v5_gn_5_23380 10.0kb upstream 10.0kb upstream 12106   true Lsat_1_v8_lg_5: 48083716-48095821 Lactuca sativa
Lsat_1_v5_gn_5_23380 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 48083716-48093715 Lactuca sativa
Lsat_1_v5_gn_5_23380 10.0kb downstream 10.0kb downstream 12106   true Lsat_1_v8_lg_5: 48093716-48105821 Lactuca sativa
Lsat_1_v5_gn_5_23380 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 48095822-48105821 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040997 5273 Angiosperm View MSA
121467100 5263 Asterids View MSA
123736835 5271 Pentapetalae View MSA
122796308 5272 Eudicot View MSA
121350543 5274 Embryophyte View MSA
123381783 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain