Gene : Lsat_1_v5_gn_5_24320 L. sativa V8
Defline:  (1 of 3) K12831 - splicing factor 3B subunit 4 (SF3B4, SAP49) Genomic Order:  694
Name:  ? Lsat_1_v5_gn_5_24320 Secondary Identifier:  ? PAC:38965885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_24320 0.5kb upstream 0.5kb upstream 4339   true Lsat_1_v8_lg_5: 51425574-51429912 Lactuca sativa
Lsat_1_v5_gn_5_24320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 51425574-51426073 Lactuca sativa
Lsat_1_v5_gn_5_24320 0.5kb downstream 0.5kb downstream 4339   true Lsat_1_v8_lg_5: 51426074-51430412 Lactuca sativa
Lsat_1_v5_gn_5_24320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 51429913-51430412 Lactuca sativa
Lsat_1_v5_gn_5_24320 1.0kb upstream 1.0kb upstream 4839   true Lsat_1_v8_lg_5: 51425074-51429912 Lactuca sativa
Lsat_1_v5_gn_5_24320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 51425074-51426073 Lactuca sativa
Lsat_1_v5_gn_5_24320 1.0kb downstream 1.0kb downstream 4839   true Lsat_1_v8_lg_5: 51426074-51430912 Lactuca sativa
Lsat_1_v5_gn_5_24320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 51429913-51430912 Lactuca sativa
Lsat_1_v5_gn_5_24320 2.0kb upstream 2.0kb upstream 5839   true Lsat_1_v8_lg_5: 51424074-51429912 Lactuca sativa
Lsat_1_v5_gn_5_24320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 51424074-51426073 Lactuca sativa
Lsat_1_v5_gn_5_24320 2.0kb downstream 2.0kb downstream 5839   true Lsat_1_v8_lg_5: 51426074-51431912 Lactuca sativa
Lsat_1_v5_gn_5_24320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 51429913-51431912 Lactuca sativa
Lsat_1_v5_gn_5_24320 5.0kb upstream 5.0kb upstream 8839   true Lsat_1_v8_lg_5: 51421074-51429912 Lactuca sativa
Lsat_1_v5_gn_5_24320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 51421074-51426073 Lactuca sativa
Lsat_1_v5_gn_5_24320 5.0kb downstream 5.0kb downstream 8839   true Lsat_1_v8_lg_5: 51426074-51434912 Lactuca sativa
Lsat_1_v5_gn_5_24320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 51429913-51434912 Lactuca sativa
Lsat_1_v5_gn_5_24320 10.0kb upstream 10.0kb upstream 13839   true Lsat_1_v8_lg_5: 51416074-51429912 Lactuca sativa
Lsat_1_v5_gn_5_24320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 51416074-51426073 Lactuca sativa
Lsat_1_v5_gn_5_24320 10.0kb downstream 10.0kb downstream 13839   true Lsat_1_v8_lg_5: 51426074-51439912 Lactuca sativa
Lsat_1_v5_gn_5_24320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 51429913-51439912 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472283 5263 Asterids View MSA
123752165 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain