Gene : Lsat_1_v5_gn_5_27120 L. sativa V8
Defline:  (1 of 1) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  754
Name:  ? Lsat_1_v5_gn_5_27120 Secondary Identifier:  ? PAC:38969814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_27120 0.5kb upstream 0.5kb upstream 4520   true Lsat_1_v8_lg_5: 57670688-57675207 Lactuca sativa
Lsat_1_v5_gn_5_27120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 57670688-57671187 Lactuca sativa
Lsat_1_v5_gn_5_27120 0.5kb downstream 0.5kb downstream 4520   true Lsat_1_v8_lg_5: 57671188-57675707 Lactuca sativa
Lsat_1_v5_gn_5_27120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 57675208-57675707 Lactuca sativa
Lsat_1_v5_gn_5_27120 1.0kb upstream 1.0kb upstream 5020   true Lsat_1_v8_lg_5: 57670188-57675207 Lactuca sativa
Lsat_1_v5_gn_5_27120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 57670188-57671187 Lactuca sativa
Lsat_1_v5_gn_5_27120 1.0kb downstream 1.0kb downstream 5020   true Lsat_1_v8_lg_5: 57671188-57676207 Lactuca sativa
Lsat_1_v5_gn_5_27120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 57675208-57676207 Lactuca sativa
Lsat_1_v5_gn_5_27120 2.0kb upstream 2.0kb upstream 6020   true Lsat_1_v8_lg_5: 57669188-57675207 Lactuca sativa
Lsat_1_v5_gn_5_27120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 57669188-57671187 Lactuca sativa
Lsat_1_v5_gn_5_27120 2.0kb downstream 2.0kb downstream 6020   true Lsat_1_v8_lg_5: 57671188-57677207 Lactuca sativa
Lsat_1_v5_gn_5_27120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 57675208-57677207 Lactuca sativa
Lsat_1_v5_gn_5_27120 5.0kb upstream 5.0kb upstream 9020   true Lsat_1_v8_lg_5: 57666188-57675207 Lactuca sativa
Lsat_1_v5_gn_5_27120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 57666188-57671187 Lactuca sativa
Lsat_1_v5_gn_5_27120 5.0kb downstream 5.0kb downstream 9020   true Lsat_1_v8_lg_5: 57671188-57680207 Lactuca sativa
Lsat_1_v5_gn_5_27120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 57675208-57680207 Lactuca sativa
Lsat_1_v5_gn_5_27120 10.0kb upstream 10.0kb upstream 14020   true Lsat_1_v8_lg_5: 57661188-57675207 Lactuca sativa
Lsat_1_v5_gn_5_27120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 57661188-57671187 Lactuca sativa
Lsat_1_v5_gn_5_27120 10.0kb downstream 10.0kb downstream 14020   true Lsat_1_v8_lg_5: 57671188-57685207 Lactuca sativa
Lsat_1_v5_gn_5_27120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 57675208-57685207 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466537 5263 Asterids View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain