Gene : Lsat_1_v5_gn_5_27661 L. sativa V8
Defline:  (1 of 3) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Genomic Order:  780
Name:  ? Lsat_1_v5_gn_5_27661 Secondary Identifier:  ? PAC:38967917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_27661 0.5kb upstream 0.5kb upstream 778   true Lsat_1_v8_lg_5: 59270538-59271315 Lactuca sativa
Lsat_1_v5_gn_5_27661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 59270816-59271315 Lactuca sativa
Lsat_1_v5_gn_5_27661 0.5kb downstream 0.5kb downstream 778   true Lsat_1_v8_lg_5: 59270038-59270815 Lactuca sativa
Lsat_1_v5_gn_5_27661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 59270038-59270537 Lactuca sativa
Lsat_1_v5_gn_5_27661 1.0kb upstream 1.0kb upstream 1278   true Lsat_1_v8_lg_5: 59270538-59271815 Lactuca sativa
Lsat_1_v5_gn_5_27661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 59270816-59271815 Lactuca sativa
Lsat_1_v5_gn_5_27661 1.0kb downstream 1.0kb downstream 1278   true Lsat_1_v8_lg_5: 59269538-59270815 Lactuca sativa
Lsat_1_v5_gn_5_27661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 59269538-59270537 Lactuca sativa
Lsat_1_v5_gn_5_27661 2.0kb upstream 2.0kb upstream 2278   true Lsat_1_v8_lg_5: 59270538-59272815 Lactuca sativa
Lsat_1_v5_gn_5_27661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 59270816-59272815 Lactuca sativa
Lsat_1_v5_gn_5_27661 2.0kb downstream 2.0kb downstream 2278   true Lsat_1_v8_lg_5: 59268538-59270815 Lactuca sativa
Lsat_1_v5_gn_5_27661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 59268538-59270537 Lactuca sativa
Lsat_1_v5_gn_5_27661 5.0kb upstream 5.0kb upstream 5278   true Lsat_1_v8_lg_5: 59270538-59275815 Lactuca sativa
Lsat_1_v5_gn_5_27661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 59270816-59275815 Lactuca sativa
Lsat_1_v5_gn_5_27661 5.0kb downstream 5.0kb downstream 5278   true Lsat_1_v8_lg_5: 59265538-59270815 Lactuca sativa
Lsat_1_v5_gn_5_27661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 59265538-59270537 Lactuca sativa
Lsat_1_v5_gn_5_27661 10.0kb upstream 10.0kb upstream 10278   true Lsat_1_v8_lg_5: 59270538-59280815 Lactuca sativa
Lsat_1_v5_gn_5_27661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 59270816-59280815 Lactuca sativa
Lsat_1_v5_gn_5_27661 10.0kb downstream 10.0kb downstream 10278   true Lsat_1_v8_lg_5: 59260538-59270815 Lactuca sativa
Lsat_1_v5_gn_5_27661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 59260538-59270537 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028381 5273 Angiosperm View MSA
121481681 5263 Asterids View MSA
123748929 5271 Pentapetalae View MSA
122772902 5272 Eudicot View MSA
121297880 5274 Embryophyte View MSA
123335894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain