Gene : Lsat_1_v5_gn_5_26820 L. sativa V8
Defline:  (1 of 2) PTHR24055//PTHR24055:SF205 - MITOGEN-ACTIVATED PROTEIN KINASE // MITOGEN-ACTIVATED PROTEIN KINASE 1-RELATED Genomic Order:  748
Name:  ? Lsat_1_v5_gn_5_26820 Secondary Identifier:  ? PAC:38971604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_26820 0.5kb upstream 0.5kb upstream 3272   true Lsat_1_v8_lg_5: 56806062-56809333 Lactuca sativa
Lsat_1_v5_gn_5_26820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 56808834-56809333 Lactuca sativa
Lsat_1_v5_gn_5_26820 0.5kb downstream 0.5kb downstream 3272   true Lsat_1_v8_lg_5: 56805562-56808833 Lactuca sativa
Lsat_1_v5_gn_5_26820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 56805562-56806061 Lactuca sativa
Lsat_1_v5_gn_5_26820 1.0kb upstream 1.0kb upstream 3772   true Lsat_1_v8_lg_5: 56806062-56809833 Lactuca sativa
Lsat_1_v5_gn_5_26820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 56808834-56809833 Lactuca sativa
Lsat_1_v5_gn_5_26820 1.0kb downstream 1.0kb downstream 3772   true Lsat_1_v8_lg_5: 56805062-56808833 Lactuca sativa
Lsat_1_v5_gn_5_26820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 56805062-56806061 Lactuca sativa
Lsat_1_v5_gn_5_26820 2.0kb upstream 2.0kb upstream 4772   true Lsat_1_v8_lg_5: 56806062-56810833 Lactuca sativa
Lsat_1_v5_gn_5_26820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 56808834-56810833 Lactuca sativa
Lsat_1_v5_gn_5_26820 2.0kb downstream 2.0kb downstream 4772   true Lsat_1_v8_lg_5: 56804062-56808833 Lactuca sativa
Lsat_1_v5_gn_5_26820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 56804062-56806061 Lactuca sativa
Lsat_1_v5_gn_5_26820 5.0kb upstream 5.0kb upstream 7772   true Lsat_1_v8_lg_5: 56806062-56813833 Lactuca sativa
Lsat_1_v5_gn_5_26820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 56808834-56813833 Lactuca sativa
Lsat_1_v5_gn_5_26820 5.0kb downstream 5.0kb downstream 7772   true Lsat_1_v8_lg_5: 56801062-56808833 Lactuca sativa
Lsat_1_v5_gn_5_26820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 56801062-56806061 Lactuca sativa
Lsat_1_v5_gn_5_26820 10.0kb upstream 10.0kb upstream 12772   true Lsat_1_v8_lg_5: 56806062-56818833 Lactuca sativa
Lsat_1_v5_gn_5_26820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 56808834-56818833 Lactuca sativa
Lsat_1_v5_gn_5_26820 10.0kb downstream 10.0kb downstream 12772   true Lsat_1_v8_lg_5: 56796062-56808833 Lactuca sativa
Lsat_1_v5_gn_5_26820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 56796062-56806061 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478027 5263 Asterids View MSA
123752459 5271 Pentapetalae View MSA
122793937 5272 Eudicot View MSA
122041657 5273 Angiosperm View MSA
121346969 5274 Embryophyte View MSA
123428294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain