Gene : Lsat_1_v5_gn_5_30240 L. sativa V8
Defline:  (1 of 1) PTHR18937//PTHR18937:SF226 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED Genomic Order:  826
Name:  ? Lsat_1_v5_gn_5_30240 Secondary Identifier:  ? PAC:38967395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_30240 0.5kb upstream 0.5kb upstream 5791   true Lsat_1_v8_lg_5: 62972467-62978257 Lactuca sativa
Lsat_1_v5_gn_5_30240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 62972467-62972966 Lactuca sativa
Lsat_1_v5_gn_5_30240 0.5kb downstream 0.5kb downstream 5791   true Lsat_1_v8_lg_5: 62972967-62978757 Lactuca sativa
Lsat_1_v5_gn_5_30240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 62978258-62978757 Lactuca sativa
Lsat_1_v5_gn_5_30240 1.0kb upstream 1.0kb upstream 6291   true Lsat_1_v8_lg_5: 62971967-62978257 Lactuca sativa
Lsat_1_v5_gn_5_30240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 62971967-62972966 Lactuca sativa
Lsat_1_v5_gn_5_30240 1.0kb downstream 1.0kb downstream 6291   true Lsat_1_v8_lg_5: 62972967-62979257 Lactuca sativa
Lsat_1_v5_gn_5_30240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 62978258-62979257 Lactuca sativa
Lsat_1_v5_gn_5_30240 2.0kb upstream 2.0kb upstream 7291   true Lsat_1_v8_lg_5: 62970967-62978257 Lactuca sativa
Lsat_1_v5_gn_5_30240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 62970967-62972966 Lactuca sativa
Lsat_1_v5_gn_5_30240 2.0kb downstream 2.0kb downstream 7291   true Lsat_1_v8_lg_5: 62972967-62980257 Lactuca sativa
Lsat_1_v5_gn_5_30240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 62978258-62980257 Lactuca sativa
Lsat_1_v5_gn_5_30240 5.0kb upstream 5.0kb upstream 10291   true Lsat_1_v8_lg_5: 62967967-62978257 Lactuca sativa
Lsat_1_v5_gn_5_30240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 62967967-62972966 Lactuca sativa
Lsat_1_v5_gn_5_30240 5.0kb downstream 5.0kb downstream 10291   true Lsat_1_v8_lg_5: 62972967-62983257 Lactuca sativa
Lsat_1_v5_gn_5_30240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 62978258-62983257 Lactuca sativa
Lsat_1_v5_gn_5_30240 10.0kb upstream 10.0kb upstream 15291   true Lsat_1_v8_lg_5: 62962967-62978257 Lactuca sativa
Lsat_1_v5_gn_5_30240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 62962967-62972966 Lactuca sativa
Lsat_1_v5_gn_5_30240 10.0kb downstream 10.0kb downstream 15291   true Lsat_1_v8_lg_5: 62972967-62988257 Lactuca sativa
Lsat_1_v5_gn_5_30240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 62978258-62988257 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471371 5263 Asterids View MSA
123739006 5271 Pentapetalae View MSA
122769942 5272 Eudicot View MSA
122047315 5273 Angiosperm View MSA
121345607 5274 Embryophyte View MSA
123380243 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain