Gene : Lsat_1_v5_gn_5_3200 L. sativa V8
Defline:  (1 of 2) K00609 - aspartate carbamoyltransferase catalytic subunit (pyrB, PYR2) Genomic Order:  72
Name:  ? Lsat_1_v5_gn_5_3200 Secondary Identifier:  ? PAC:38969063
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY0-162 Lactuca sativa pathologic  
Lsativa PWY-5686 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_3200 0.5kb upstream 0.5kb upstream 3362   true Lsat_1_v8_lg_5: 5346066-5349427 Lactuca sativa
Lsat_1_v5_gn_5_3200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 5348928-5349427 Lactuca sativa
Lsat_1_v5_gn_5_3200 0.5kb downstream 0.5kb downstream 3362   true Lsat_1_v8_lg_5: 5345566-5348927 Lactuca sativa
Lsat_1_v5_gn_5_3200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 5345566-5346065 Lactuca sativa
Lsat_1_v5_gn_5_3200 1.0kb upstream 1.0kb upstream 3862   true Lsat_1_v8_lg_5: 5346066-5349927 Lactuca sativa
Lsat_1_v5_gn_5_3200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 5348928-5349927 Lactuca sativa
Lsat_1_v5_gn_5_3200 1.0kb downstream 1.0kb downstream 3862   true Lsat_1_v8_lg_5: 5345066-5348927 Lactuca sativa
Lsat_1_v5_gn_5_3200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 5345066-5346065 Lactuca sativa
Lsat_1_v5_gn_5_3200 2.0kb upstream 2.0kb upstream 4862   true Lsat_1_v8_lg_5: 5346066-5350927 Lactuca sativa
Lsat_1_v5_gn_5_3200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 5348928-5350927 Lactuca sativa
Lsat_1_v5_gn_5_3200 2.0kb downstream 2.0kb downstream 4862   true Lsat_1_v8_lg_5: 5344066-5348927 Lactuca sativa
Lsat_1_v5_gn_5_3200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 5344066-5346065 Lactuca sativa
Lsat_1_v5_gn_5_3200 5.0kb upstream 5.0kb upstream 7862   true Lsat_1_v8_lg_5: 5346066-5353927 Lactuca sativa
Lsat_1_v5_gn_5_3200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 5348928-5353927 Lactuca sativa
Lsat_1_v5_gn_5_3200 5.0kb downstream 5.0kb downstream 7862   true Lsat_1_v8_lg_5: 5341066-5348927 Lactuca sativa
Lsat_1_v5_gn_5_3200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 5341066-5346065 Lactuca sativa
Lsat_1_v5_gn_5_3200 10.0kb upstream 10.0kb upstream 12862   true Lsat_1_v8_lg_5: 5346066-5358927 Lactuca sativa
Lsat_1_v5_gn_5_3200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 5348928-5358927 Lactuca sativa
Lsat_1_v5_gn_5_3200 10.0kb downstream 10.0kb downstream 12862   true Lsat_1_v8_lg_5: 5336066-5348927 Lactuca sativa
Lsat_1_v5_gn_5_3200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 5336066-5346065 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479535 5263 Asterids View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain