Gene : Lsat_1_v5_gn_5_32121 L. sativa V8
Defline:  (1 of 2) PTHR22595//PTHR22595:SF47 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  890
Name:  ? Lsat_1_v5_gn_5_32121 Secondary Identifier:  ? PAC:38970287
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_32121 0.5kb upstream 0.5kb upstream 3414   true Lsat_1_v8_lg_5: 68374583-68377996 Lactuca sativa
Lsat_1_v5_gn_5_32121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 68374583-68375082 Lactuca sativa
Lsat_1_v5_gn_5_32121 0.5kb downstream 0.5kb downstream 3414   true Lsat_1_v8_lg_5: 68375083-68378496 Lactuca sativa
Lsat_1_v5_gn_5_32121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 68377997-68378496 Lactuca sativa
Lsat_1_v5_gn_5_32121 1.0kb upstream 1.0kb upstream 3914   true Lsat_1_v8_lg_5: 68374083-68377996 Lactuca sativa
Lsat_1_v5_gn_5_32121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 68374083-68375082 Lactuca sativa
Lsat_1_v5_gn_5_32121 1.0kb downstream 1.0kb downstream 3914   true Lsat_1_v8_lg_5: 68375083-68378996 Lactuca sativa
Lsat_1_v5_gn_5_32121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 68377997-68378996 Lactuca sativa
Lsat_1_v5_gn_5_32121 2.0kb upstream 2.0kb upstream 4914   true Lsat_1_v8_lg_5: 68373083-68377996 Lactuca sativa
Lsat_1_v5_gn_5_32121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 68373083-68375082 Lactuca sativa
Lsat_1_v5_gn_5_32121 2.0kb downstream 2.0kb downstream 4914   true Lsat_1_v8_lg_5: 68375083-68379996 Lactuca sativa
Lsat_1_v5_gn_5_32121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 68377997-68379996 Lactuca sativa
Lsat_1_v5_gn_5_32121 5.0kb upstream 5.0kb upstream 7914   true Lsat_1_v8_lg_5: 68370083-68377996 Lactuca sativa
Lsat_1_v5_gn_5_32121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 68370083-68375082 Lactuca sativa
Lsat_1_v5_gn_5_32121 5.0kb downstream 5.0kb downstream 7914   true Lsat_1_v8_lg_5: 68375083-68382996 Lactuca sativa
Lsat_1_v5_gn_5_32121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 68377997-68382996 Lactuca sativa
Lsat_1_v5_gn_5_32121 10.0kb upstream 10.0kb upstream 12914   true Lsat_1_v8_lg_5: 68365083-68377996 Lactuca sativa
Lsat_1_v5_gn_5_32121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 68365083-68375082 Lactuca sativa
Lsat_1_v5_gn_5_32121 10.0kb downstream 10.0kb downstream 12914   true Lsat_1_v8_lg_5: 68375083-68387996 Lactuca sativa
Lsat_1_v5_gn_5_32121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 68377997-68387996 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475843 5263 Asterids View MSA
123742328 5271 Pentapetalae View MSA
122795225 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain