Gene : Lsat_1_v5_gn_5_3140 L. sativa V8
Defline:  (1 of 2) 2.7.7.69 - GDP-L-galactose phosphorylase Genomic Order:  75
Name:  ? Lsat_1_v5_gn_5_3140 Secondary Identifier:  ? PAC:38970385
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-882 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_3140 0.5kb upstream 0.5kb upstream 3059   true Lsat_1_v8_lg_5: 5371174-5374232 Lactuca sativa
Lsat_1_v5_gn_5_3140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 5373733-5374232 Lactuca sativa
Lsat_1_v5_gn_5_3140 0.5kb downstream 0.5kb downstream 3059   true Lsat_1_v8_lg_5: 5370674-5373732 Lactuca sativa
Lsat_1_v5_gn_5_3140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 5370674-5371173 Lactuca sativa
Lsat_1_v5_gn_5_3140 1.0kb upstream 1.0kb upstream 3559   true Lsat_1_v8_lg_5: 5371174-5374732 Lactuca sativa
Lsat_1_v5_gn_5_3140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 5373733-5374732 Lactuca sativa
Lsat_1_v5_gn_5_3140 1.0kb downstream 1.0kb downstream 3559   true Lsat_1_v8_lg_5: 5370174-5373732 Lactuca sativa
Lsat_1_v5_gn_5_3140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 5370174-5371173 Lactuca sativa
Lsat_1_v5_gn_5_3140 2.0kb upstream 2.0kb upstream 4559   true Lsat_1_v8_lg_5: 5371174-5375732 Lactuca sativa
Lsat_1_v5_gn_5_3140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 5373733-5375732 Lactuca sativa
Lsat_1_v5_gn_5_3140 2.0kb downstream 2.0kb downstream 4559   true Lsat_1_v8_lg_5: 5369174-5373732 Lactuca sativa
Lsat_1_v5_gn_5_3140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 5369174-5371173 Lactuca sativa
Lsat_1_v5_gn_5_3140 5.0kb upstream 5.0kb upstream 7559   true Lsat_1_v8_lg_5: 5371174-5378732 Lactuca sativa
Lsat_1_v5_gn_5_3140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 5373733-5378732 Lactuca sativa
Lsat_1_v5_gn_5_3140 5.0kb downstream 5.0kb downstream 7559   true Lsat_1_v8_lg_5: 5366174-5373732 Lactuca sativa
Lsat_1_v5_gn_5_3140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 5366174-5371173 Lactuca sativa
Lsat_1_v5_gn_5_3140 10.0kb upstream 10.0kb upstream 12559   true Lsat_1_v8_lg_5: 5371174-5383732 Lactuca sativa
Lsat_1_v5_gn_5_3140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 5373733-5383732 Lactuca sativa
Lsat_1_v5_gn_5_3140 10.0kb downstream 10.0kb downstream 12559   true Lsat_1_v8_lg_5: 5361174-5373732 Lactuca sativa
Lsat_1_v5_gn_5_3140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 5361174-5371173 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479816 5263 Asterids View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain