Gene : Lsat_1_v5_gn_5_32541 L. sativa V8
Defline:  (1 of 6) PTHR11909//PTHR11909:SF73 - CASEIN KINASE-RELATED // PROTEIN KINASE FAMILY PROTEIN Genomic Order:  909
Name:  ? Lsat_1_v5_gn_5_32541 Secondary Identifier:  ? PAC:38967209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_32541 0.5kb upstream 0.5kb upstream 5572   true Lsat_1_v8_lg_5: 69779847-69785418 Lactuca sativa
Lsat_1_v5_gn_5_32541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 69779847-69780346 Lactuca sativa
Lsat_1_v5_gn_5_32541 0.5kb downstream 0.5kb downstream 5572   true Lsat_1_v8_lg_5: 69780347-69785918 Lactuca sativa
Lsat_1_v5_gn_5_32541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 69785419-69785918 Lactuca sativa
Lsat_1_v5_gn_5_32541 1.0kb upstream 1.0kb upstream 6072   true Lsat_1_v8_lg_5: 69779347-69785418 Lactuca sativa
Lsat_1_v5_gn_5_32541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 69779347-69780346 Lactuca sativa
Lsat_1_v5_gn_5_32541 1.0kb downstream 1.0kb downstream 6072   true Lsat_1_v8_lg_5: 69780347-69786418 Lactuca sativa
Lsat_1_v5_gn_5_32541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 69785419-69786418 Lactuca sativa
Lsat_1_v5_gn_5_32541 2.0kb upstream 2.0kb upstream 7072   true Lsat_1_v8_lg_5: 69778347-69785418 Lactuca sativa
Lsat_1_v5_gn_5_32541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 69778347-69780346 Lactuca sativa
Lsat_1_v5_gn_5_32541 2.0kb downstream 2.0kb downstream 7072   true Lsat_1_v8_lg_5: 69780347-69787418 Lactuca sativa
Lsat_1_v5_gn_5_32541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 69785419-69787418 Lactuca sativa
Lsat_1_v5_gn_5_32541 5.0kb upstream 5.0kb upstream 10072   true Lsat_1_v8_lg_5: 69775347-69785418 Lactuca sativa
Lsat_1_v5_gn_5_32541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 69775347-69780346 Lactuca sativa
Lsat_1_v5_gn_5_32541 5.0kb downstream 5.0kb downstream 10072   true Lsat_1_v8_lg_5: 69780347-69790418 Lactuca sativa
Lsat_1_v5_gn_5_32541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 69785419-69790418 Lactuca sativa
Lsat_1_v5_gn_5_32541 10.0kb upstream 10.0kb upstream 15072   true Lsat_1_v8_lg_5: 69770347-69785418 Lactuca sativa
Lsat_1_v5_gn_5_32541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 69770347-69780346 Lactuca sativa
Lsat_1_v5_gn_5_32541 10.0kb downstream 10.0kb downstream 15072   true Lsat_1_v8_lg_5: 69780347-69795418 Lactuca sativa
Lsat_1_v5_gn_5_32541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 69785419-69795418 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466983 5263 Asterids View MSA
123746261 5271 Pentapetalae View MSA
122793480 5272 Eudicot View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain