Gene : Lsat_1_v5_gn_5_33680 L. sativa V8
Defline:  (1 of 1) PTHR12649//PTHR12649:SF12 - PEPTIDYL-TRNA HYDROLASE 2 // PEPTIDYL-TRNA HYDROLASE II (PTH2) FAMILY PROTEIN Genomic Order:  915
Name:  ? Lsat_1_v5_gn_5_33680 Secondary Identifier:  ? PAC:38967868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_33680 0.5kb upstream 0.5kb upstream 4385   true Lsat_1_v8_lg_5: 70117027-70121411 Lactuca sativa
Lsat_1_v5_gn_5_33680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 70120912-70121411 Lactuca sativa
Lsat_1_v5_gn_5_33680 0.5kb downstream 0.5kb downstream 4385   true Lsat_1_v8_lg_5: 70116527-70120911 Lactuca sativa
Lsat_1_v5_gn_5_33680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 70116527-70117026 Lactuca sativa
Lsat_1_v5_gn_5_33680 1.0kb upstream 1.0kb upstream 4885   true Lsat_1_v8_lg_5: 70117027-70121911 Lactuca sativa
Lsat_1_v5_gn_5_33680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 70120912-70121911 Lactuca sativa
Lsat_1_v5_gn_5_33680 1.0kb downstream 1.0kb downstream 4885   true Lsat_1_v8_lg_5: 70116027-70120911 Lactuca sativa
Lsat_1_v5_gn_5_33680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 70116027-70117026 Lactuca sativa
Lsat_1_v5_gn_5_33680 2.0kb upstream 2.0kb upstream 5885   true Lsat_1_v8_lg_5: 70117027-70122911 Lactuca sativa
Lsat_1_v5_gn_5_33680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 70120912-70122911 Lactuca sativa
Lsat_1_v5_gn_5_33680 2.0kb downstream 2.0kb downstream 5885   true Lsat_1_v8_lg_5: 70115027-70120911 Lactuca sativa
Lsat_1_v5_gn_5_33680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 70115027-70117026 Lactuca sativa
Lsat_1_v5_gn_5_33680 5.0kb upstream 5.0kb upstream 8885   true Lsat_1_v8_lg_5: 70117027-70125911 Lactuca sativa
Lsat_1_v5_gn_5_33680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 70120912-70125911 Lactuca sativa
Lsat_1_v5_gn_5_33680 5.0kb downstream 5.0kb downstream 8885   true Lsat_1_v8_lg_5: 70112027-70120911 Lactuca sativa
Lsat_1_v5_gn_5_33680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 70112027-70117026 Lactuca sativa
Lsat_1_v5_gn_5_33680 10.0kb upstream 10.0kb upstream 13885   true Lsat_1_v8_lg_5: 70117027-70130911 Lactuca sativa
Lsat_1_v5_gn_5_33680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 70120912-70130911 Lactuca sativa
Lsat_1_v5_gn_5_33680 10.0kb downstream 10.0kb downstream 13885   true Lsat_1_v8_lg_5: 70107027-70120911 Lactuca sativa
Lsat_1_v5_gn_5_33680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 70107027-70117026 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041458 5273 Angiosperm View MSA
121468309 5263 Asterids View MSA
123745404 5271 Pentapetalae View MSA
122792467 5272 Eudicot View MSA
121347943 5274 Embryophyte View MSA
123426949 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain