Gene : Lsat_1_v5_gn_5_79940 L. sativa V8
Defline:  (1 of 6) KOG0253 - Synaptic vesicle transporter SV2 (major facilitator superfamily) Genomic Order:  2140
Name:  ? Lsat_1_v5_gn_5_79940 Secondary Identifier:  ? PAC:38969065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_79940 0.5kb upstream 0.5kb upstream 5174   true Lsat_1_v8_lg_5: 182506733-182511906 Lactuca sativa
Lsat_1_v5_gn_5_79940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 182511407-182511906 Lactuca sativa
Lsat_1_v5_gn_5_79940 0.5kb downstream 0.5kb downstream 5174   true Lsat_1_v8_lg_5: 182506233-182511406 Lactuca sativa
Lsat_1_v5_gn_5_79940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 182506233-182506732 Lactuca sativa
Lsat_1_v5_gn_5_79940 1.0kb upstream 1.0kb upstream 5674   true Lsat_1_v8_lg_5: 182506733-182512406 Lactuca sativa
Lsat_1_v5_gn_5_79940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 182511407-182512406 Lactuca sativa
Lsat_1_v5_gn_5_79940 1.0kb downstream 1.0kb downstream 5674   true Lsat_1_v8_lg_5: 182505733-182511406 Lactuca sativa
Lsat_1_v5_gn_5_79940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 182505733-182506732 Lactuca sativa
Lsat_1_v5_gn_5_79940 2.0kb upstream 2.0kb upstream 6674   true Lsat_1_v8_lg_5: 182506733-182513406 Lactuca sativa
Lsat_1_v5_gn_5_79940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 182511407-182513406 Lactuca sativa
Lsat_1_v5_gn_5_79940 2.0kb downstream 2.0kb downstream 6674   true Lsat_1_v8_lg_5: 182504733-182511406 Lactuca sativa
Lsat_1_v5_gn_5_79940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 182504733-182506732 Lactuca sativa
Lsat_1_v5_gn_5_79940 5.0kb upstream 5.0kb upstream 9674   true Lsat_1_v8_lg_5: 182506733-182516406 Lactuca sativa
Lsat_1_v5_gn_5_79940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 182511407-182516406 Lactuca sativa
Lsat_1_v5_gn_5_79940 5.0kb downstream 5.0kb downstream 9674   true Lsat_1_v8_lg_5: 182501733-182511406 Lactuca sativa
Lsat_1_v5_gn_5_79940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 182501733-182506732 Lactuca sativa
Lsat_1_v5_gn_5_79940 10.0kb upstream 10.0kb upstream 14674   true Lsat_1_v8_lg_5: 182506733-182521406 Lactuca sativa
Lsat_1_v5_gn_5_79940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 182511407-182521406 Lactuca sativa
Lsat_1_v5_gn_5_79940 10.0kb downstream 10.0kb downstream 14674   true Lsat_1_v8_lg_5: 182496733-182511406 Lactuca sativa
Lsat_1_v5_gn_5_79940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 182496733-182506732 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028498 5273 Angiosperm View MSA
121466330 5263 Asterids View MSA
123749372 5271 Pentapetalae View MSA
122787311 5272 Eudicot View MSA
123429172 5275 Viridiplantae View MSA
121348293 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain