Gene : Lsat_1_v5_gn_5_80920 L. sativa V8
Defline:  (1 of 3) PTHR31355:SF5 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  2125
Name:  ? Lsat_1_v5_gn_5_80920 Secondary Identifier:  ? PAC:38963398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_80920 0.5kb upstream 0.5kb upstream 4414   true Lsat_1_v8_lg_5: 181805028-181809441 Lactuca sativa
Lsat_1_v5_gn_5_80920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 181805028-181805527 Lactuca sativa
Lsat_1_v5_gn_5_80920 0.5kb downstream 0.5kb downstream 4414   true Lsat_1_v8_lg_5: 181805528-181809941 Lactuca sativa
Lsat_1_v5_gn_5_80920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 181809442-181809941 Lactuca sativa
Lsat_1_v5_gn_5_80920 1.0kb upstream 1.0kb upstream 4914   true Lsat_1_v8_lg_5: 181804528-181809441 Lactuca sativa
Lsat_1_v5_gn_5_80920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 181804528-181805527 Lactuca sativa
Lsat_1_v5_gn_5_80920 1.0kb downstream 1.0kb downstream 4914   true Lsat_1_v8_lg_5: 181805528-181810441 Lactuca sativa
Lsat_1_v5_gn_5_80920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 181809442-181810441 Lactuca sativa
Lsat_1_v5_gn_5_80920 2.0kb upstream 2.0kb upstream 5914   true Lsat_1_v8_lg_5: 181803528-181809441 Lactuca sativa
Lsat_1_v5_gn_5_80920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 181803528-181805527 Lactuca sativa
Lsat_1_v5_gn_5_80920 2.0kb downstream 2.0kb downstream 5914   true Lsat_1_v8_lg_5: 181805528-181811441 Lactuca sativa
Lsat_1_v5_gn_5_80920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 181809442-181811441 Lactuca sativa
Lsat_1_v5_gn_5_80920 5.0kb upstream 5.0kb upstream 8914   true Lsat_1_v8_lg_5: 181800528-181809441 Lactuca sativa
Lsat_1_v5_gn_5_80920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 181800528-181805527 Lactuca sativa
Lsat_1_v5_gn_5_80920 5.0kb downstream 5.0kb downstream 8914   true Lsat_1_v8_lg_5: 181805528-181814441 Lactuca sativa
Lsat_1_v5_gn_5_80920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 181809442-181814441 Lactuca sativa
Lsat_1_v5_gn_5_80920 10.0kb upstream 10.0kb upstream 13914   true Lsat_1_v8_lg_5: 181795528-181809441 Lactuca sativa
Lsat_1_v5_gn_5_80920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 181795528-181805527 Lactuca sativa
Lsat_1_v5_gn_5_80920 10.0kb downstream 10.0kb downstream 13914   true Lsat_1_v8_lg_5: 181805528-181819441 Lactuca sativa
Lsat_1_v5_gn_5_80920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 181809442-181819441 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468824 5263 Asterids View MSA
123737726 5271 Pentapetalae View MSA
122786179 5272 Eudicot View MSA
122044340 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain