Gene : Lsat_1_v5_gn_5_80860 L. sativa V8
Defline:  (1 of 3) K01853 - cycloartenol synthase (E5.4.99.8) Genomic Order:  2123
Name:  ? Lsat_1_v5_gn_5_80860 Secondary Identifier:  ? PAC:38971483
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2541 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_80860 0.5kb upstream 0.5kb upstream 17959   true Lsat_1_v8_lg_5: 181730164-181748122 Lactuca sativa
Lsat_1_v5_gn_5_80860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 181730164-181730663 Lactuca sativa
Lsat_1_v5_gn_5_80860 0.5kb downstream 0.5kb downstream 17959   true Lsat_1_v8_lg_5: 181730664-181748622 Lactuca sativa
Lsat_1_v5_gn_5_80860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 181748123-181748622 Lactuca sativa
Lsat_1_v5_gn_5_80860 1.0kb upstream 1.0kb upstream 18459   true Lsat_1_v8_lg_5: 181729664-181748122 Lactuca sativa
Lsat_1_v5_gn_5_80860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 181729664-181730663 Lactuca sativa
Lsat_1_v5_gn_5_80860 1.0kb downstream 1.0kb downstream 18459   true Lsat_1_v8_lg_5: 181730664-181749122 Lactuca sativa
Lsat_1_v5_gn_5_80860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 181748123-181749122 Lactuca sativa
Lsat_1_v5_gn_5_80860 2.0kb upstream 2.0kb upstream 19459   true Lsat_1_v8_lg_5: 181728664-181748122 Lactuca sativa
Lsat_1_v5_gn_5_80860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 181728664-181730663 Lactuca sativa
Lsat_1_v5_gn_5_80860 2.0kb downstream 2.0kb downstream 19459   true Lsat_1_v8_lg_5: 181730664-181750122 Lactuca sativa
Lsat_1_v5_gn_5_80860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 181748123-181750122 Lactuca sativa
Lsat_1_v5_gn_5_80860 5.0kb upstream 5.0kb upstream 22459   true Lsat_1_v8_lg_5: 181725664-181748122 Lactuca sativa
Lsat_1_v5_gn_5_80860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 181725664-181730663 Lactuca sativa
Lsat_1_v5_gn_5_80860 5.0kb downstream 5.0kb downstream 22459   true Lsat_1_v8_lg_5: 181730664-181753122 Lactuca sativa
Lsat_1_v5_gn_5_80860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 181748123-181753122 Lactuca sativa
Lsat_1_v5_gn_5_80860 10.0kb upstream 10.0kb upstream 27459   true Lsat_1_v8_lg_5: 181720664-181748122 Lactuca sativa
Lsat_1_v5_gn_5_80860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 181720664-181730663 Lactuca sativa
Lsat_1_v5_gn_5_80860 10.0kb downstream 10.0kb downstream 27459   true Lsat_1_v8_lg_5: 181730664-181758122 Lactuca sativa
Lsat_1_v5_gn_5_80860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 181748123-181758122 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474133 5263 Asterids View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain