Gene : Lsat_1_v5_gn_5_81081 L. sativa V8
Defline:  (1 of 3) K00703 - starch synthase (E2.4.1.21, glgA) Genomic Order:  2131
Name:  ? Lsat_1_v5_gn_5_81081 Secondary Identifier:  ? PAC:38967141
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLYCOGENSYNTH-PWY Lactuca sativa pathologic  
Lsativa PWY-622 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_81081 0.5kb upstream 0.5kb upstream 5515   true Lsat_1_v8_lg_5: 181988786-181994300 Lactuca sativa
Lsat_1_v5_gn_5_81081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 181993801-181994300 Lactuca sativa
Lsat_1_v5_gn_5_81081 0.5kb downstream 0.5kb downstream 5515   true Lsat_1_v8_lg_5: 181988286-181993800 Lactuca sativa
Lsat_1_v5_gn_5_81081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 181988286-181988785 Lactuca sativa
Lsat_1_v5_gn_5_81081 1.0kb upstream 1.0kb upstream 6015   true Lsat_1_v8_lg_5: 181988786-181994800 Lactuca sativa
Lsat_1_v5_gn_5_81081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 181993801-181994800 Lactuca sativa
Lsat_1_v5_gn_5_81081 1.0kb downstream 1.0kb downstream 6015   true Lsat_1_v8_lg_5: 181987786-181993800 Lactuca sativa
Lsat_1_v5_gn_5_81081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 181987786-181988785 Lactuca sativa
Lsat_1_v5_gn_5_81081 2.0kb upstream 2.0kb upstream 7015   true Lsat_1_v8_lg_5: 181988786-181995800 Lactuca sativa
Lsat_1_v5_gn_5_81081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 181993801-181995800 Lactuca sativa
Lsat_1_v5_gn_5_81081 2.0kb downstream 2.0kb downstream 7015   true Lsat_1_v8_lg_5: 181986786-181993800 Lactuca sativa
Lsat_1_v5_gn_5_81081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 181986786-181988785 Lactuca sativa
Lsat_1_v5_gn_5_81081 5.0kb upstream 5.0kb upstream 10015   true Lsat_1_v8_lg_5: 181988786-181998800 Lactuca sativa
Lsat_1_v5_gn_5_81081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 181993801-181998800 Lactuca sativa
Lsat_1_v5_gn_5_81081 5.0kb downstream 5.0kb downstream 10015   true Lsat_1_v8_lg_5: 181983786-181993800 Lactuca sativa
Lsat_1_v5_gn_5_81081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 181983786-181988785 Lactuca sativa
Lsat_1_v5_gn_5_81081 10.0kb upstream 10.0kb upstream 15015   true Lsat_1_v8_lg_5: 181988786-182003800 Lactuca sativa
Lsat_1_v5_gn_5_81081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 181993801-182003800 Lactuca sativa
Lsat_1_v5_gn_5_81081 10.0kb downstream 10.0kb downstream 15015   true Lsat_1_v8_lg_5: 181978786-181993800 Lactuca sativa
Lsat_1_v5_gn_5_81081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 181978786-181988785 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469731 5263 Asterids View MSA
123751940 5271 Pentapetalae View MSA
122774263 5272 Eudicot View MSA
122049203 5273 Angiosperm View MSA
121349172 5274 Embryophyte View MSA
123428648 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain