Gene : Lsat_1_v5_gn_5_84081 L. sativa V8
Defline:  (1 of 2) PTHR31747//PTHR31747:SF3 - FAMILY NOT NAMED // PROTEIN LSD1 Genomic Order:  2193
Name:  ? Lsat_1_v5_gn_5_84081 Secondary Identifier:  ? PAC:38969755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_84081 0.5kb upstream 0.5kb upstream 2479   true Lsat_1_v8_lg_5: 188477511-188479989 Lactuca sativa
Lsat_1_v5_gn_5_84081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 188479490-188479989 Lactuca sativa
Lsat_1_v5_gn_5_84081 0.5kb downstream 0.5kb downstream 2479   true Lsat_1_v8_lg_5: 188477011-188479489 Lactuca sativa
Lsat_1_v5_gn_5_84081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 188477011-188477510 Lactuca sativa
Lsat_1_v5_gn_5_84081 1.0kb upstream 1.0kb upstream 2979   true Lsat_1_v8_lg_5: 188477511-188480489 Lactuca sativa
Lsat_1_v5_gn_5_84081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 188479490-188480489 Lactuca sativa
Lsat_1_v5_gn_5_84081 1.0kb downstream 1.0kb downstream 2979   true Lsat_1_v8_lg_5: 188476511-188479489 Lactuca sativa
Lsat_1_v5_gn_5_84081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 188476511-188477510 Lactuca sativa
Lsat_1_v5_gn_5_84081 2.0kb upstream 2.0kb upstream 3979   true Lsat_1_v8_lg_5: 188477511-188481489 Lactuca sativa
Lsat_1_v5_gn_5_84081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 188479490-188481489 Lactuca sativa
Lsat_1_v5_gn_5_84081 2.0kb downstream 2.0kb downstream 3979   true Lsat_1_v8_lg_5: 188475511-188479489 Lactuca sativa
Lsat_1_v5_gn_5_84081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 188475511-188477510 Lactuca sativa
Lsat_1_v5_gn_5_84081 5.0kb upstream 5.0kb upstream 6979   true Lsat_1_v8_lg_5: 188477511-188484489 Lactuca sativa
Lsat_1_v5_gn_5_84081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 188479490-188484489 Lactuca sativa
Lsat_1_v5_gn_5_84081 5.0kb downstream 5.0kb downstream 6979   true Lsat_1_v8_lg_5: 188472511-188479489 Lactuca sativa
Lsat_1_v5_gn_5_84081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 188472511-188477510 Lactuca sativa
Lsat_1_v5_gn_5_84081 10.0kb upstream 10.0kb upstream 11979   true Lsat_1_v8_lg_5: 188477511-188489489 Lactuca sativa
Lsat_1_v5_gn_5_84081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 188479490-188489489 Lactuca sativa
Lsat_1_v5_gn_5_84081 10.0kb downstream 10.0kb downstream 11979   true Lsat_1_v8_lg_5: 188467511-188479489 Lactuca sativa
Lsat_1_v5_gn_5_84081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 188467511-188477510 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468165 5263 Asterids View MSA
123749218 5271 Pentapetalae View MSA
122793241 5272 Eudicot View MSA
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain