Gene : Lsat_1_v5_gn_5_88180 L. sativa V8
Defline:  (1 of 37) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  2286
Name:  ? Lsat_1_v5_gn_5_88180 Secondary Identifier:  ? PAC:38968705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_88180 0.5kb upstream 0.5kb upstream 5674   true Lsat_1_v8_lg_5: 196671353-196677026 Lactuca sativa
Lsat_1_v5_gn_5_88180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 196676527-196677026 Lactuca sativa
Lsat_1_v5_gn_5_88180 0.5kb downstream 0.5kb downstream 5674   true Lsat_1_v8_lg_5: 196670853-196676526 Lactuca sativa
Lsat_1_v5_gn_5_88180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 196670853-196671352 Lactuca sativa
Lsat_1_v5_gn_5_88180 1.0kb upstream 1.0kb upstream 6174   true Lsat_1_v8_lg_5: 196671353-196677526 Lactuca sativa
Lsat_1_v5_gn_5_88180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 196676527-196677526 Lactuca sativa
Lsat_1_v5_gn_5_88180 1.0kb downstream 1.0kb downstream 6174   true Lsat_1_v8_lg_5: 196670353-196676526 Lactuca sativa
Lsat_1_v5_gn_5_88180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 196670353-196671352 Lactuca sativa
Lsat_1_v5_gn_5_88180 2.0kb upstream 2.0kb upstream 7174   true Lsat_1_v8_lg_5: 196671353-196678526 Lactuca sativa
Lsat_1_v5_gn_5_88180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 196676527-196678526 Lactuca sativa
Lsat_1_v5_gn_5_88180 2.0kb downstream 2.0kb downstream 7174   true Lsat_1_v8_lg_5: 196669353-196676526 Lactuca sativa
Lsat_1_v5_gn_5_88180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 196669353-196671352 Lactuca sativa
Lsat_1_v5_gn_5_88180 5.0kb upstream 5.0kb upstream 10174   true Lsat_1_v8_lg_5: 196671353-196681526 Lactuca sativa
Lsat_1_v5_gn_5_88180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 196676527-196681526 Lactuca sativa
Lsat_1_v5_gn_5_88180 5.0kb downstream 5.0kb downstream 10174   true Lsat_1_v8_lg_5: 196666353-196676526 Lactuca sativa
Lsat_1_v5_gn_5_88180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 196666353-196671352 Lactuca sativa
Lsat_1_v5_gn_5_88180 10.0kb upstream 10.0kb upstream 15174   true Lsat_1_v8_lg_5: 196671353-196686526 Lactuca sativa
Lsat_1_v5_gn_5_88180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 196676527-196686526 Lactuca sativa
Lsat_1_v5_gn_5_88180 10.0kb downstream 10.0kb downstream 15174   true Lsat_1_v8_lg_5: 196661353-196676526 Lactuca sativa
Lsat_1_v5_gn_5_88180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 196661353-196671352 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467257 5263 Asterids View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain