Gene : Lsat_1_v5_gn_5_8941 L. sativa V8
Defline:  (1 of 1) KOG4552 - Vitamin-D-receptor interacting protein complex component Genomic Order:  220
Name:  ? Lsat_1_v5_gn_5_8941 Secondary Identifier:  ? PAC:38964670
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_8941 0.5kb upstream 0.5kb upstream 2651   true Lsat_1_v8_lg_5: 15391325-15393975 Lactuca sativa
Lsat_1_v5_gn_5_8941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 15391325-15391824 Lactuca sativa
Lsat_1_v5_gn_5_8941 0.5kb downstream 0.5kb downstream 2651   true Lsat_1_v8_lg_5: 15391825-15394475 Lactuca sativa
Lsat_1_v5_gn_5_8941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 15393976-15394475 Lactuca sativa
Lsat_1_v5_gn_5_8941 1.0kb upstream 1.0kb upstream 3151   true Lsat_1_v8_lg_5: 15390825-15393975 Lactuca sativa
Lsat_1_v5_gn_5_8941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 15390825-15391824 Lactuca sativa
Lsat_1_v5_gn_5_8941 1.0kb downstream 1.0kb downstream 3151   true Lsat_1_v8_lg_5: 15391825-15394975 Lactuca sativa
Lsat_1_v5_gn_5_8941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 15393976-15394975 Lactuca sativa
Lsat_1_v5_gn_5_8941 2.0kb upstream 2.0kb upstream 4151   true Lsat_1_v8_lg_5: 15389825-15393975 Lactuca sativa
Lsat_1_v5_gn_5_8941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 15389825-15391824 Lactuca sativa
Lsat_1_v5_gn_5_8941 2.0kb downstream 2.0kb downstream 4151   true Lsat_1_v8_lg_5: 15391825-15395975 Lactuca sativa
Lsat_1_v5_gn_5_8941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 15393976-15395975 Lactuca sativa
Lsat_1_v5_gn_5_8941 5.0kb upstream 5.0kb upstream 7151   true Lsat_1_v8_lg_5: 15386825-15393975 Lactuca sativa
Lsat_1_v5_gn_5_8941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 15386825-15391824 Lactuca sativa
Lsat_1_v5_gn_5_8941 5.0kb downstream 5.0kb downstream 7151   true Lsat_1_v8_lg_5: 15391825-15398975 Lactuca sativa
Lsat_1_v5_gn_5_8941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 15393976-15398975 Lactuca sativa
Lsat_1_v5_gn_5_8941 10.0kb upstream 10.0kb upstream 12151   true Lsat_1_v8_lg_5: 15381825-15393975 Lactuca sativa
Lsat_1_v5_gn_5_8941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 15381825-15391824 Lactuca sativa
Lsat_1_v5_gn_5_8941 10.0kb downstream 10.0kb downstream 12151   true Lsat_1_v8_lg_5: 15391825-15403975 Lactuca sativa
Lsat_1_v5_gn_5_8941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 15393976-15403975 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468294 5263 Asterids View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain