Gene : Lsat_1_v5_gn_5_89401 L. sativa V8
Defline:  (1 of 2) PTHR31807//PTHR31807:SF2 - FAMILY NOT NAMED // HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  2328
Name:  ? Lsat_1_v5_gn_5_89401 Secondary Identifier:  ? PAC:38968936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_89401 0.5kb upstream 0.5kb upstream 4166   true Lsat_1_v8_lg_5: 198846015-198850180 Lactuca sativa
Lsat_1_v5_gn_5_89401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 198849681-198850180 Lactuca sativa
Lsat_1_v5_gn_5_89401 0.5kb downstream 0.5kb downstream 4166   true Lsat_1_v8_lg_5: 198845515-198849680 Lactuca sativa
Lsat_1_v5_gn_5_89401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 198845515-198846014 Lactuca sativa
Lsat_1_v5_gn_5_89401 1.0kb upstream 1.0kb upstream 4666   true Lsat_1_v8_lg_5: 198846015-198850680 Lactuca sativa
Lsat_1_v5_gn_5_89401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 198849681-198850680 Lactuca sativa
Lsat_1_v5_gn_5_89401 1.0kb downstream 1.0kb downstream 4666   true Lsat_1_v8_lg_5: 198845015-198849680 Lactuca sativa
Lsat_1_v5_gn_5_89401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 198845015-198846014 Lactuca sativa
Lsat_1_v5_gn_5_89401 2.0kb upstream 2.0kb upstream 5666   true Lsat_1_v8_lg_5: 198846015-198851680 Lactuca sativa
Lsat_1_v5_gn_5_89401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 198849681-198851680 Lactuca sativa
Lsat_1_v5_gn_5_89401 2.0kb downstream 2.0kb downstream 5666   true Lsat_1_v8_lg_5: 198844015-198849680 Lactuca sativa
Lsat_1_v5_gn_5_89401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 198844015-198846014 Lactuca sativa
Lsat_1_v5_gn_5_89401 5.0kb upstream 5.0kb upstream 8666   true Lsat_1_v8_lg_5: 198846015-198854680 Lactuca sativa
Lsat_1_v5_gn_5_89401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 198849681-198854680 Lactuca sativa
Lsat_1_v5_gn_5_89401 5.0kb downstream 5.0kb downstream 8666   true Lsat_1_v8_lg_5: 198841015-198849680 Lactuca sativa
Lsat_1_v5_gn_5_89401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 198841015-198846014 Lactuca sativa
Lsat_1_v5_gn_5_89401 10.0kb upstream 10.0kb upstream 13666   true Lsat_1_v8_lg_5: 198846015-198859680 Lactuca sativa
Lsat_1_v5_gn_5_89401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 198849681-198859680 Lactuca sativa
Lsat_1_v5_gn_5_89401 10.0kb downstream 10.0kb downstream 13666   true Lsat_1_v8_lg_5: 198836015-198849680 Lactuca sativa
Lsat_1_v5_gn_5_89401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 198836015-198846014 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473739 5263 Asterids View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain