Gene : Lsat_1_v5_gn_5_8881 L. sativa V8
Defline:  (1 of 1) PTHR34948//PTHR34948:SF2 - FAMILY NOT NAMED // TRIPHOSPHATE TUNEL METALLOENZYME 3 Genomic Order:  222
Name:  ? Lsat_1_v5_gn_5_8881 Secondary Identifier:  ? PAC:38966525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_8881 0.5kb upstream 0.5kb upstream 1475   true Lsat_1_v8_lg_5: 15404100-15405574 Lactuca sativa
Lsat_1_v5_gn_5_8881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 15404100-15404599 Lactuca sativa
Lsat_1_v5_gn_5_8881 0.5kb downstream 0.5kb downstream 1475   true Lsat_1_v8_lg_5: 15404600-15406074 Lactuca sativa
Lsat_1_v5_gn_5_8881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 15405575-15406074 Lactuca sativa
Lsat_1_v5_gn_5_8881 1.0kb upstream 1.0kb upstream 1975   true Lsat_1_v8_lg_5: 15403600-15405574 Lactuca sativa
Lsat_1_v5_gn_5_8881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 15403600-15404599 Lactuca sativa
Lsat_1_v5_gn_5_8881 1.0kb downstream 1.0kb downstream 1975   true Lsat_1_v8_lg_5: 15404600-15406574 Lactuca sativa
Lsat_1_v5_gn_5_8881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 15405575-15406574 Lactuca sativa
Lsat_1_v5_gn_5_8881 2.0kb upstream 2.0kb upstream 2975   true Lsat_1_v8_lg_5: 15402600-15405574 Lactuca sativa
Lsat_1_v5_gn_5_8881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 15402600-15404599 Lactuca sativa
Lsat_1_v5_gn_5_8881 2.0kb downstream 2.0kb downstream 2975   true Lsat_1_v8_lg_5: 15404600-15407574 Lactuca sativa
Lsat_1_v5_gn_5_8881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 15405575-15407574 Lactuca sativa
Lsat_1_v5_gn_5_8881 5.0kb upstream 5.0kb upstream 5975   true Lsat_1_v8_lg_5: 15399600-15405574 Lactuca sativa
Lsat_1_v5_gn_5_8881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 15399600-15404599 Lactuca sativa
Lsat_1_v5_gn_5_8881 5.0kb downstream 5.0kb downstream 5975   true Lsat_1_v8_lg_5: 15404600-15410574 Lactuca sativa
Lsat_1_v5_gn_5_8881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 15405575-15410574 Lactuca sativa
Lsat_1_v5_gn_5_8881 10.0kb upstream 10.0kb upstream 10975   true Lsat_1_v8_lg_5: 15394600-15405574 Lactuca sativa
Lsat_1_v5_gn_5_8881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 15394600-15404599 Lactuca sativa
Lsat_1_v5_gn_5_8881 10.0kb downstream 10.0kb downstream 10975   true Lsat_1_v8_lg_5: 15404600-15415574 Lactuca sativa
Lsat_1_v5_gn_5_8881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 15405575-15415574 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472856 5263 Asterids View MSA
123747724 5271 Pentapetalae View MSA
122786251 5272 Eudicot View MSA
122047583 5273 Angiosperm View MSA
121347010 5274 Embryophyte View MSA
123425047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain