Gene : Lsat_1_v5_gn_5_92700 L. sativa V8
Defline:  (1 of 1) PTHR12948//PTHR12948:SF3 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN // NEDD8 ULTIMATE BUSTER 1 Genomic Order:  2437
Name:  ? Lsat_1_v5_gn_5_92700 Secondary Identifier:  ? PAC:38971346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_92700 0.5kb upstream 0.5kb upstream 5280   true Lsat_1_v8_lg_5: 203876799-203882078 Lactuca sativa
Lsat_1_v5_gn_5_92700 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 203876799-203877298 Lactuca sativa
Lsat_1_v5_gn_5_92700 0.5kb downstream 0.5kb downstream 5280   true Lsat_1_v8_lg_5: 203877299-203882578 Lactuca sativa
Lsat_1_v5_gn_5_92700 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 203882079-203882578 Lactuca sativa
Lsat_1_v5_gn_5_92700 1.0kb upstream 1.0kb upstream 5780   true Lsat_1_v8_lg_5: 203876299-203882078 Lactuca sativa
Lsat_1_v5_gn_5_92700 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 203876299-203877298 Lactuca sativa
Lsat_1_v5_gn_5_92700 1.0kb downstream 1.0kb downstream 5780   true Lsat_1_v8_lg_5: 203877299-203883078 Lactuca sativa
Lsat_1_v5_gn_5_92700 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 203882079-203883078 Lactuca sativa
Lsat_1_v5_gn_5_92700 2.0kb upstream 2.0kb upstream 6780   true Lsat_1_v8_lg_5: 203875299-203882078 Lactuca sativa
Lsat_1_v5_gn_5_92700 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 203875299-203877298 Lactuca sativa
Lsat_1_v5_gn_5_92700 2.0kb downstream 2.0kb downstream 6780   true Lsat_1_v8_lg_5: 203877299-203884078 Lactuca sativa
Lsat_1_v5_gn_5_92700 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 203882079-203884078 Lactuca sativa
Lsat_1_v5_gn_5_92700 5.0kb upstream 5.0kb upstream 9780   true Lsat_1_v8_lg_5: 203872299-203882078 Lactuca sativa
Lsat_1_v5_gn_5_92700 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 203872299-203877298 Lactuca sativa
Lsat_1_v5_gn_5_92700 5.0kb downstream 5.0kb downstream 9780   true Lsat_1_v8_lg_5: 203877299-203887078 Lactuca sativa
Lsat_1_v5_gn_5_92700 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 203882079-203887078 Lactuca sativa
Lsat_1_v5_gn_5_92700 10.0kb upstream 10.0kb upstream 14780   true Lsat_1_v8_lg_5: 203867299-203882078 Lactuca sativa
Lsat_1_v5_gn_5_92700 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 203867299-203877298 Lactuca sativa
Lsat_1_v5_gn_5_92700 10.0kb downstream 10.0kb downstream 14780   true Lsat_1_v8_lg_5: 203877299-203892078 Lactuca sativa
Lsat_1_v5_gn_5_92700 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 203882079-203892078 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474587 5263 Asterids View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain