Gene : Lsat_1_v5_gn_5_9321 L. sativa V8
Defline:  (1 of 9) PF07899 - Frigida-like protein (Frigida) Genomic Order:  269
Name:  ? Lsat_1_v5_gn_5_9321 Secondary Identifier:  ? PAC:38969728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_9321 0.5kb upstream 0.5kb upstream 3497   true Lsat_1_v8_lg_5: 18512194-18515690 Lactuca sativa
Lsat_1_v5_gn_5_9321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 18512194-18512693 Lactuca sativa
Lsat_1_v5_gn_5_9321 0.5kb downstream 0.5kb downstream 3497   true Lsat_1_v8_lg_5: 18512694-18516190 Lactuca sativa
Lsat_1_v5_gn_5_9321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 18515691-18516190 Lactuca sativa
Lsat_1_v5_gn_5_9321 1.0kb upstream 1.0kb upstream 3997   true Lsat_1_v8_lg_5: 18511694-18515690 Lactuca sativa
Lsat_1_v5_gn_5_9321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 18511694-18512693 Lactuca sativa
Lsat_1_v5_gn_5_9321 1.0kb downstream 1.0kb downstream 3997   true Lsat_1_v8_lg_5: 18512694-18516690 Lactuca sativa
Lsat_1_v5_gn_5_9321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 18515691-18516690 Lactuca sativa
Lsat_1_v5_gn_5_9321 2.0kb upstream 2.0kb upstream 4997   true Lsat_1_v8_lg_5: 18510694-18515690 Lactuca sativa
Lsat_1_v5_gn_5_9321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 18510694-18512693 Lactuca sativa
Lsat_1_v5_gn_5_9321 2.0kb downstream 2.0kb downstream 4997   true Lsat_1_v8_lg_5: 18512694-18517690 Lactuca sativa
Lsat_1_v5_gn_5_9321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 18515691-18517690 Lactuca sativa
Lsat_1_v5_gn_5_9321 5.0kb upstream 5.0kb upstream 7997   true Lsat_1_v8_lg_5: 18507694-18515690 Lactuca sativa
Lsat_1_v5_gn_5_9321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 18507694-18512693 Lactuca sativa
Lsat_1_v5_gn_5_9321 5.0kb downstream 5.0kb downstream 7997   true Lsat_1_v8_lg_5: 18512694-18520690 Lactuca sativa
Lsat_1_v5_gn_5_9321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 18515691-18520690 Lactuca sativa
Lsat_1_v5_gn_5_9321 10.0kb upstream 10.0kb upstream 12997   true Lsat_1_v8_lg_5: 18502694-18515690 Lactuca sativa
Lsat_1_v5_gn_5_9321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 18502694-18512693 Lactuca sativa
Lsat_1_v5_gn_5_9321 10.0kb downstream 10.0kb downstream 12997   true Lsat_1_v8_lg_5: 18512694-18525690 Lactuca sativa
Lsat_1_v5_gn_5_9321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 18515691-18525690 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470387 5263 Asterids View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain