Gene : Lsat_1_v5_gn_5_9541 L. sativa V8
Defline:  (1 of 1) PTHR21385:SF1 - C2H2-LIKE ZINC FINGER PROTEIN Genomic Order:  276
Name:  ? Lsat_1_v5_gn_5_9541 Secondary Identifier:  ? PAC:38966856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_9541 0.5kb upstream 0.5kb upstream 3508   true Lsat_1_v8_lg_5: 18725492-18728999 Lactuca sativa
Lsat_1_v5_gn_5_9541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 18728500-18728999 Lactuca sativa
Lsat_1_v5_gn_5_9541 0.5kb downstream 0.5kb downstream 3508   true Lsat_1_v8_lg_5: 18724992-18728499 Lactuca sativa
Lsat_1_v5_gn_5_9541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 18724992-18725491 Lactuca sativa
Lsat_1_v5_gn_5_9541 1.0kb upstream 1.0kb upstream 4008   true Lsat_1_v8_lg_5: 18725492-18729499 Lactuca sativa
Lsat_1_v5_gn_5_9541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 18728500-18729499 Lactuca sativa
Lsat_1_v5_gn_5_9541 1.0kb downstream 1.0kb downstream 4008   true Lsat_1_v8_lg_5: 18724492-18728499 Lactuca sativa
Lsat_1_v5_gn_5_9541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 18724492-18725491 Lactuca sativa
Lsat_1_v5_gn_5_9541 2.0kb upstream 2.0kb upstream 5008   true Lsat_1_v8_lg_5: 18725492-18730499 Lactuca sativa
Lsat_1_v5_gn_5_9541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 18728500-18730499 Lactuca sativa
Lsat_1_v5_gn_5_9541 2.0kb downstream 2.0kb downstream 5008   true Lsat_1_v8_lg_5: 18723492-18728499 Lactuca sativa
Lsat_1_v5_gn_5_9541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 18723492-18725491 Lactuca sativa
Lsat_1_v5_gn_5_9541 5.0kb upstream 5.0kb upstream 8008   true Lsat_1_v8_lg_5: 18725492-18733499 Lactuca sativa
Lsat_1_v5_gn_5_9541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 18728500-18733499 Lactuca sativa
Lsat_1_v5_gn_5_9541 5.0kb downstream 5.0kb downstream 8008   true Lsat_1_v8_lg_5: 18720492-18728499 Lactuca sativa
Lsat_1_v5_gn_5_9541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 18720492-18725491 Lactuca sativa
Lsat_1_v5_gn_5_9541 10.0kb upstream 10.0kb upstream 13008   true Lsat_1_v8_lg_5: 18725492-18738499 Lactuca sativa
Lsat_1_v5_gn_5_9541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 18728500-18738499 Lactuca sativa
Lsat_1_v5_gn_5_9541 10.0kb downstream 10.0kb downstream 13008   true Lsat_1_v8_lg_5: 18715492-18728499 Lactuca sativa
Lsat_1_v5_gn_5_9541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 18715492-18725491 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470832 5263 Asterids View MSA
123738749 5271 Pentapetalae View MSA
122792091 5272 Eudicot View MSA
122042462 5273 Angiosperm View MSA
121347105 5274 Embryophyte View MSA
123424913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain