Gene : Lsat_1_v5_gn_5_96921 L. sativa V8
Defline:  (1 of 3) PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Genomic Order:  2479
Name:  ? Lsat_1_v5_gn_5_96921 Secondary Identifier:  ? PAC:38967578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_96921 0.5kb upstream 0.5kb upstream 9363   true Lsat_1_v8_lg_5: 207146444-207155806 Lactuca sativa
Lsat_1_v5_gn_5_96921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 207146444-207146943 Lactuca sativa
Lsat_1_v5_gn_5_96921 0.5kb downstream 0.5kb downstream 9363   true Lsat_1_v8_lg_5: 207146944-207156306 Lactuca sativa
Lsat_1_v5_gn_5_96921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 207155807-207156306 Lactuca sativa
Lsat_1_v5_gn_5_96921 1.0kb upstream 1.0kb upstream 9863   true Lsat_1_v8_lg_5: 207145944-207155806 Lactuca sativa
Lsat_1_v5_gn_5_96921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 207145944-207146943 Lactuca sativa
Lsat_1_v5_gn_5_96921 1.0kb downstream 1.0kb downstream 9863   true Lsat_1_v8_lg_5: 207146944-207156806 Lactuca sativa
Lsat_1_v5_gn_5_96921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 207155807-207156806 Lactuca sativa
Lsat_1_v5_gn_5_96921 2.0kb upstream 2.0kb upstream 10863   true Lsat_1_v8_lg_5: 207144944-207155806 Lactuca sativa
Lsat_1_v5_gn_5_96921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 207144944-207146943 Lactuca sativa
Lsat_1_v5_gn_5_96921 2.0kb downstream 2.0kb downstream 10863   true Lsat_1_v8_lg_5: 207146944-207157806 Lactuca sativa
Lsat_1_v5_gn_5_96921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 207155807-207157806 Lactuca sativa
Lsat_1_v5_gn_5_96921 5.0kb upstream 5.0kb upstream 13863   true Lsat_1_v8_lg_5: 207141944-207155806 Lactuca sativa
Lsat_1_v5_gn_5_96921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 207141944-207146943 Lactuca sativa
Lsat_1_v5_gn_5_96921 5.0kb downstream 5.0kb downstream 13863   true Lsat_1_v8_lg_5: 207146944-207160806 Lactuca sativa
Lsat_1_v5_gn_5_96921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 207155807-207160806 Lactuca sativa
Lsat_1_v5_gn_5_96921 10.0kb upstream 10.0kb upstream 18863   true Lsat_1_v8_lg_5: 207136944-207155806 Lactuca sativa
Lsat_1_v5_gn_5_96921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 207136944-207146943 Lactuca sativa
Lsat_1_v5_gn_5_96921 10.0kb downstream 10.0kb downstream 18863   true Lsat_1_v8_lg_5: 207146944-207165806 Lactuca sativa
Lsat_1_v5_gn_5_96921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 207155807-207165806 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468077 5263 Asterids View MSA
123752786 5271 Pentapetalae View MSA
122794247 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain