Gene : Lsat_1_v5_gn_5_59280 L. sativa V8
Defline:  (1 of 1) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48) Genomic Order:  1600
Name:  ? Lsat_1_v5_gn_5_59280 Secondary Identifier:  ? PAC:38963597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_59280 0.5kb upstream 0.5kb upstream 7292   true Lsat_1_v8_lg_5: 138686709-138694000 Lactuca sativa
Lsat_1_v5_gn_5_59280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 138686709-138687208 Lactuca sativa
Lsat_1_v5_gn_5_59280 0.5kb downstream 0.5kb downstream 7292   true Lsat_1_v8_lg_5: 138687209-138694500 Lactuca sativa
Lsat_1_v5_gn_5_59280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 138694001-138694500 Lactuca sativa
Lsat_1_v5_gn_5_59280 1.0kb upstream 1.0kb upstream 7792   true Lsat_1_v8_lg_5: 138686209-138694000 Lactuca sativa
Lsat_1_v5_gn_5_59280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 138686209-138687208 Lactuca sativa
Lsat_1_v5_gn_5_59280 1.0kb downstream 1.0kb downstream 7792   true Lsat_1_v8_lg_5: 138687209-138695000 Lactuca sativa
Lsat_1_v5_gn_5_59280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 138694001-138695000 Lactuca sativa
Lsat_1_v5_gn_5_59280 2.0kb upstream 2.0kb upstream 8792   true Lsat_1_v8_lg_5: 138685209-138694000 Lactuca sativa
Lsat_1_v5_gn_5_59280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 138685209-138687208 Lactuca sativa
Lsat_1_v5_gn_5_59280 2.0kb downstream 2.0kb downstream 8792   true Lsat_1_v8_lg_5: 138687209-138696000 Lactuca sativa
Lsat_1_v5_gn_5_59280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 138694001-138696000 Lactuca sativa
Lsat_1_v5_gn_5_59280 5.0kb upstream 5.0kb upstream 11792   true Lsat_1_v8_lg_5: 138682209-138694000 Lactuca sativa
Lsat_1_v5_gn_5_59280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 138682209-138687208 Lactuca sativa
Lsat_1_v5_gn_5_59280 5.0kb downstream 5.0kb downstream 11792   true Lsat_1_v8_lg_5: 138687209-138699000 Lactuca sativa
Lsat_1_v5_gn_5_59280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 138694001-138699000 Lactuca sativa
Lsat_1_v5_gn_5_59280 10.0kb upstream 10.0kb upstream 16792   true Lsat_1_v8_lg_5: 138677209-138694000 Lactuca sativa
Lsat_1_v5_gn_5_59280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 138677209-138687208 Lactuca sativa
Lsat_1_v5_gn_5_59280 10.0kb downstream 10.0kb downstream 16792   true Lsat_1_v8_lg_5: 138687209-138704000 Lactuca sativa
Lsat_1_v5_gn_5_59280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 138694001-138704000 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468678 5263 Asterids View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain