Gene : Lsat_1_v5_gn_5_59840 L. sativa V8
Defline:  (1 of 3) PTHR10106//PTHR10106:SF19 - CYTOCHROME B561-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1581
Name:  ? Lsat_1_v5_gn_5_59840 Secondary Identifier:  ? PAC:38965566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_59840 0.5kb upstream 0.5kb upstream 2538   true Lsat_1_v8_lg_5: 137396291-137398828 Lactuca sativa
Lsat_1_v5_gn_5_59840 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 137396291-137396790 Lactuca sativa
Lsat_1_v5_gn_5_59840 0.5kb downstream 0.5kb downstream 2538   true Lsat_1_v8_lg_5: 137396791-137399328 Lactuca sativa
Lsat_1_v5_gn_5_59840 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 137398829-137399328 Lactuca sativa
Lsat_1_v5_gn_5_59840 1.0kb upstream 1.0kb upstream 3038   true Lsat_1_v8_lg_5: 137395791-137398828 Lactuca sativa
Lsat_1_v5_gn_5_59840 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 137395791-137396790 Lactuca sativa
Lsat_1_v5_gn_5_59840 1.0kb downstream 1.0kb downstream 3038   true Lsat_1_v8_lg_5: 137396791-137399828 Lactuca sativa
Lsat_1_v5_gn_5_59840 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 137398829-137399828 Lactuca sativa
Lsat_1_v5_gn_5_59840 2.0kb upstream 2.0kb upstream 4038   true Lsat_1_v8_lg_5: 137394791-137398828 Lactuca sativa
Lsat_1_v5_gn_5_59840 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 137394791-137396790 Lactuca sativa
Lsat_1_v5_gn_5_59840 2.0kb downstream 2.0kb downstream 4038   true Lsat_1_v8_lg_5: 137396791-137400828 Lactuca sativa
Lsat_1_v5_gn_5_59840 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 137398829-137400828 Lactuca sativa
Lsat_1_v5_gn_5_59840 5.0kb upstream 5.0kb upstream 7038   true Lsat_1_v8_lg_5: 137391791-137398828 Lactuca sativa
Lsat_1_v5_gn_5_59840 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 137391791-137396790 Lactuca sativa
Lsat_1_v5_gn_5_59840 5.0kb downstream 5.0kb downstream 7038   true Lsat_1_v8_lg_5: 137396791-137403828 Lactuca sativa
Lsat_1_v5_gn_5_59840 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 137398829-137403828 Lactuca sativa
Lsat_1_v5_gn_5_59840 10.0kb upstream 10.0kb upstream 12038   true Lsat_1_v8_lg_5: 137386791-137398828 Lactuca sativa
Lsat_1_v5_gn_5_59840 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 137386791-137396790 Lactuca sativa
Lsat_1_v5_gn_5_59840 10.0kb downstream 10.0kb downstream 12038   true Lsat_1_v8_lg_5: 137396791-137408828 Lactuca sativa
Lsat_1_v5_gn_5_59840 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 137398829-137408828 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453930 5263 Asterids View MSA
123742556 5271 Pentapetalae View MSA
122794187 5272 Eudicot View MSA
122048589 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121311029 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain