Gene : Lsat_1_v5_gn_5_65220 L. sativa V8
Defline:  (1 of 2) PTHR24362//PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK // SERINE/THREONINE-PROTEIN KINASE NEK5 Genomic Order:  1695
Name:  ? Lsat_1_v5_gn_5_65220 Secondary Identifier:  ? PAC:38968814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_65220 0.5kb upstream 0.5kb upstream 5104   true Lsat_1_v8_lg_5: 144774495-144779598 Lactuca sativa
Lsat_1_v5_gn_5_65220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 144774495-144774994 Lactuca sativa
Lsat_1_v5_gn_5_65220 0.5kb downstream 0.5kb downstream 5104   true Lsat_1_v8_lg_5: 144774995-144780098 Lactuca sativa
Lsat_1_v5_gn_5_65220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 144779599-144780098 Lactuca sativa
Lsat_1_v5_gn_5_65220 1.0kb upstream 1.0kb upstream 5604   true Lsat_1_v8_lg_5: 144773995-144779598 Lactuca sativa
Lsat_1_v5_gn_5_65220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 144773995-144774994 Lactuca sativa
Lsat_1_v5_gn_5_65220 1.0kb downstream 1.0kb downstream 5604   true Lsat_1_v8_lg_5: 144774995-144780598 Lactuca sativa
Lsat_1_v5_gn_5_65220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 144779599-144780598 Lactuca sativa
Lsat_1_v5_gn_5_65220 2.0kb upstream 2.0kb upstream 6604   true Lsat_1_v8_lg_5: 144772995-144779598 Lactuca sativa
Lsat_1_v5_gn_5_65220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 144772995-144774994 Lactuca sativa
Lsat_1_v5_gn_5_65220 2.0kb downstream 2.0kb downstream 6604   true Lsat_1_v8_lg_5: 144774995-144781598 Lactuca sativa
Lsat_1_v5_gn_5_65220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 144779599-144781598 Lactuca sativa
Lsat_1_v5_gn_5_65220 5.0kb upstream 5.0kb upstream 9604   true Lsat_1_v8_lg_5: 144769995-144779598 Lactuca sativa
Lsat_1_v5_gn_5_65220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 144769995-144774994 Lactuca sativa
Lsat_1_v5_gn_5_65220 5.0kb downstream 5.0kb downstream 9604   true Lsat_1_v8_lg_5: 144774995-144784598 Lactuca sativa
Lsat_1_v5_gn_5_65220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 144779599-144784598 Lactuca sativa
Lsat_1_v5_gn_5_65220 10.0kb upstream 10.0kb upstream 14604   true Lsat_1_v8_lg_5: 144764995-144779598 Lactuca sativa
Lsat_1_v5_gn_5_65220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 144764995-144774994 Lactuca sativa
Lsat_1_v5_gn_5_65220 10.0kb downstream 10.0kb downstream 14604   true Lsat_1_v8_lg_5: 144774995-144789598 Lactuca sativa
Lsat_1_v5_gn_5_65220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 144779599-144789598 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469470 5263 Asterids View MSA
123747232 5271 Pentapetalae View MSA
122789599 5272 Eudicot View MSA
122047293 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain