Gene : Lsat_1_v5_gn_5_64980 L. sativa V8
Defline:  (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase Genomic Order:  1712
Name:  ? Lsat_1_v5_gn_5_64980 Secondary Identifier:  ? PAC:38970239
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLYSYN-ALA-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_64980 0.5kb upstream 0.5kb upstream 13083   true Lsat_1_v8_lg_5: 145458700-145471782 Lactuca sativa
Lsat_1_v5_gn_5_64980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 145458700-145459199 Lactuca sativa
Lsat_1_v5_gn_5_64980 0.5kb downstream 0.5kb downstream 13083   true Lsat_1_v8_lg_5: 145459200-145472282 Lactuca sativa
Lsat_1_v5_gn_5_64980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 145471783-145472282 Lactuca sativa
Lsat_1_v5_gn_5_64980 1.0kb upstream 1.0kb upstream 13583   true Lsat_1_v8_lg_5: 145458200-145471782 Lactuca sativa
Lsat_1_v5_gn_5_64980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 145458200-145459199 Lactuca sativa
Lsat_1_v5_gn_5_64980 1.0kb downstream 1.0kb downstream 13583   true Lsat_1_v8_lg_5: 145459200-145472782 Lactuca sativa
Lsat_1_v5_gn_5_64980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 145471783-145472782 Lactuca sativa
Lsat_1_v5_gn_5_64980 2.0kb upstream 2.0kb upstream 14583   true Lsat_1_v8_lg_5: 145457200-145471782 Lactuca sativa
Lsat_1_v5_gn_5_64980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 145457200-145459199 Lactuca sativa
Lsat_1_v5_gn_5_64980 2.0kb downstream 2.0kb downstream 14583   true Lsat_1_v8_lg_5: 145459200-145473782 Lactuca sativa
Lsat_1_v5_gn_5_64980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 145471783-145473782 Lactuca sativa
Lsat_1_v5_gn_5_64980 5.0kb upstream 5.0kb upstream 17583   true Lsat_1_v8_lg_5: 145454200-145471782 Lactuca sativa
Lsat_1_v5_gn_5_64980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 145454200-145459199 Lactuca sativa
Lsat_1_v5_gn_5_64980 5.0kb downstream 5.0kb downstream 17583   true Lsat_1_v8_lg_5: 145459200-145476782 Lactuca sativa
Lsat_1_v5_gn_5_64980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 145471783-145476782 Lactuca sativa
Lsat_1_v5_gn_5_64980 10.0kb upstream 10.0kb upstream 22583   true Lsat_1_v8_lg_5: 145449200-145471782 Lactuca sativa
Lsat_1_v5_gn_5_64980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 145449200-145459199 Lactuca sativa
Lsat_1_v5_gn_5_64980 10.0kb downstream 10.0kb downstream 22583   true Lsat_1_v8_lg_5: 145459200-145481782 Lactuca sativa
Lsat_1_v5_gn_5_64980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 145471783-145481782 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467191 5263 Asterids View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain