Gene : Lsat_1_v5_gn_5_6460 L. sativa V8
Defline:  (1 of 4) K02978 - small subunit ribosomal protein S27e (RP-S27e, RPS27) Genomic Order:  207
Name:  ? Lsat_1_v5_gn_5_6460 Secondary Identifier:  ? PAC:38969561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_6460 0.5kb upstream 0.5kb upstream 2891   true Lsat_1_v8_lg_5: 14291439-14294329 Lactuca sativa
Lsat_1_v5_gn_5_6460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 14291439-14291938 Lactuca sativa
Lsat_1_v5_gn_5_6460 0.5kb downstream 0.5kb downstream 2891   true Lsat_1_v8_lg_5: 14291939-14294829 Lactuca sativa
Lsat_1_v5_gn_5_6460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 14294330-14294829 Lactuca sativa
Lsat_1_v5_gn_5_6460 1.0kb upstream 1.0kb upstream 3391   true Lsat_1_v8_lg_5: 14290939-14294329 Lactuca sativa
Lsat_1_v5_gn_5_6460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 14290939-14291938 Lactuca sativa
Lsat_1_v5_gn_5_6460 1.0kb downstream 1.0kb downstream 3391   true Lsat_1_v8_lg_5: 14291939-14295329 Lactuca sativa
Lsat_1_v5_gn_5_6460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 14294330-14295329 Lactuca sativa
Lsat_1_v5_gn_5_6460 2.0kb upstream 2.0kb upstream 4391   true Lsat_1_v8_lg_5: 14289939-14294329 Lactuca sativa
Lsat_1_v5_gn_5_6460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 14289939-14291938 Lactuca sativa
Lsat_1_v5_gn_5_6460 2.0kb downstream 2.0kb downstream 4391   true Lsat_1_v8_lg_5: 14291939-14296329 Lactuca sativa
Lsat_1_v5_gn_5_6460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 14294330-14296329 Lactuca sativa
Lsat_1_v5_gn_5_6460 5.0kb upstream 5.0kb upstream 7391   true Lsat_1_v8_lg_5: 14286939-14294329 Lactuca sativa
Lsat_1_v5_gn_5_6460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 14286939-14291938 Lactuca sativa
Lsat_1_v5_gn_5_6460 5.0kb downstream 5.0kb downstream 7391   true Lsat_1_v8_lg_5: 14291939-14299329 Lactuca sativa
Lsat_1_v5_gn_5_6460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 14294330-14299329 Lactuca sativa
Lsat_1_v5_gn_5_6460 10.0kb upstream 10.0kb upstream 12391   true Lsat_1_v8_lg_5: 14281939-14294329 Lactuca sativa
Lsat_1_v5_gn_5_6460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 14281939-14291938 Lactuca sativa
Lsat_1_v5_gn_5_6460 10.0kb downstream 10.0kb downstream 12391   true Lsat_1_v8_lg_5: 14291939-14304329 Lactuca sativa
Lsat_1_v5_gn_5_6460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 14294330-14304329 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
121481990 5263 Asterids View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain